Thalassotalea sp. PS06: FNC98_15225
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Entry
FNC98_15225 CDS
T06100
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
thap
Thalassotalea sp. PS06
Pathway
thap00300
Lysine biosynthesis
thap00470
D-Amino acid metabolism
thap01100
Metabolic pathways
thap01110
Biosynthesis of secondary metabolites
thap01120
Microbial metabolism in diverse environments
thap01230
Biosynthesis of amino acids
Module
thap_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FNC98_15225 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FNC98_15225 (dapF)
Enzymes [BR:
thap01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FNC98_15225 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
QDP03050
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Position
complement(3439927..3440754)
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AA seq
275 aa
AA seq
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MVNFSKMHGLGNDFMVLDNVTQNVFLSNEQIRQFADRNFGIGFDQLLVVEPPYDPDLDFH
YRIFNADGSEVSQCGNGARCFARFVRMKGLTNKNKIKVSTASGKMTLHVERDGLITVTMP
VPNLEPAKIPFTAQKQEGTYIMRTDDQTVFCGAVSMGNPHCVLEVDSVADAPVDTLGKAL
SLHERFPEHANVGFMEIQSPKYIKLRVYERGAAETLACGSGACAAVVVGIIQEKLANNVT
VELPGGKLKIYWKGPGHPVKMTGPAKHVFDGTLSI
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatttttctaagatgcatggtctgggtaacgacttcatggtgttagataacgtc
actcaaaacgtatttctttctaatgagcaaattcggcagtttgcggatcgaaattttggc
ataggctttgaccagctattggtggttgaacctccttatgatccggatctggattttcat
taccggatatttaatgccgatggtagtgaggttagccaatgtggtaacggcgcccgctgt
tttgcccgcttcgtgcgaatgaaaggcctaaccaataaaaacaaaattaaggtttccacc
gcatccgggaagatgaccctgcatgttgagcgcgatggcctgattaccgtaactatgcca
gtgccaaacctggaaccggcgaaaataccttttactgcgcaaaaacaggaaggtacctac
attatgcgtactgacgatcagactgtgttttgcggtgctgtctcgatgggtaacccccac
tgtgtattggaagtggattccgtagcagatgcgccagtcgataccttaggcaaagcactg
tctttgcatgaacgttttcctgaacatgccaatgttggcttcatggaaatccagtcaccg
aaatacattaaacttcgtgtttacgagcgtggcgcggcggaaacgctggcttgtggtagt
ggtgcctgtgcggcggttgtggttggcattattcaggaaaagcttgctaataatgtcacc
gtagaactacccggtggtaagttgaaaatatactggaaaggtcccggtcacccagtgaaa
atgactggacctgcgaaacacgtatttgatggaaccttatcgatatga
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