Thalassobaculum sp. OXR-137: T8K17_00555
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Entry
T8K17_00555 CDS
T09627
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
thar
Thalassobaculum sp. OXR-137
Pathway
thar00550
Peptidoglycan biosynthesis
thar01100
Metabolic pathways
thar01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
T8K17_00555 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
T8K17_00555 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thar01011
]
T8K17_00555 (mrdA)
Enzymes [BR:
thar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
T8K17_00555 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
thar01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
T8K17_00555 (mrdA)
BRITE hierarchy
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WPZ34638
LinkDB
All DBs
Position
complement(118594..120600)
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AA seq
668 aa
AA seq
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MLKASEQDVQKVFTRRALVLAGAKLGLIGALGARLYYLQVVEADRYELLSRGNQFNLELL
PPIRGRILDRNGVALADNQDNFRVEIVREQTDDVAATLSALRSIIEVPDWDVRRVLKDVK
RKRAFVPVTVVENLTREEIARVAVNAPYLPGIRIEVGRSRRYPFADTAVHITGYVAAVSE
SELTGDPVLELPDFRIGKSGIEKLHDLSMRGTAGRRQVEVNALGRIIRKLPGEDGEPGRD
VKLALDINLQRFATERLARGNAERLPTEDPRAQLALAEAEPALRDLYADRQTVLINEKGK
VIEAESGSVVVMDVHTGELRALASAPGYDPNPFNRGLSAKDWEELLTNPRGPLNNKAVAG
QYPPGSTFKMLVMLAALESGLAGPDTKFFCPGHLELGDTRFHCWSRYGHGWVDMKQSIAQ
SCDVYYYELAKRIGIDRIAAIAKRFGLGDVTGVDIPGERRGLVPTREWKLATTGVPWQMG
ETLVAAIGQGFNLTTPLQLALMTARLVNGGKAVVPHLEIPDGPLPPAEDMAVDSRHLDAV
RAAMSEVVNGPRGTARKIQGDKDDIKLAGKTGTAQVRRITMADRASGAYKDEKPWRYRDH
ALFVGFGPVEAPRYAVAVVVEHGGGGSSMAAPIGADVLREALRIDPPAPPGPTASDSKDD
DEPARRDG
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaggcaagcgaacaggacgtccaaaaggtcttcacccggcgagcgctggtgctg
gccggagccaagctcggcctgatcggcgcgctgggcgctcggctgtattatctgcaggtg
gtcgaggccgaccgctacgagctgctgtcgcgcggcaaccagttcaacctggaactcctg
ccgccgatccgcggccggatcctcgaccgcaacggcgtggcgctggccgacaaccaggac
aatttccgcgtcgaaatcgttcgcgagcagaccgacgacgtggccgccaccctgtcggcc
ctgcgctcgatcatcgaggtgccggactgggacgtccgccgggtgctgaaggatgtgaag
cgcaagcgcgccttcgttccggtcaccgtggtggagaacctgacccgcgaggagatcgcc
cgggtggcggtcaacgcgccgtacctgcccggcatccgcatcgaggtcggccggtcccgc
cgctatcccttcgccgacacggcggtccacatcaccggctatgtggcggccgtgtcggag
agcgagctgaccggcgacccggtgctggagctgccggacttccgcatcggcaagagcggc
atcgagaagctgcacgacctgagcatgcgcggcaccgccggccgccgccaggtcgaggtc
aacgccctgggccggatcatccgcaagctgccgggcgaggacggggagccggggcgcgac
gtcaagctcgcgctggacatcaacctgcagcgcttcgccaccgagcggctggcgcggggc
aatgccgaacggttgccgaccgaggatccgcgggcgcagctcgctctggcggaggcggaa
ccggccctgagggacctatatgccgaccggcagaccgtcctgatcaacgagaagggcaag
gtgatcgaggctgagagcgggtccgtcgtggtcatggacgtccataccggcgaattgcgg
gcgctggcctcggcccccggctacgatccgaacccgttcaaccgcggcctgtccgcgaag
gactgggaagagcttctgaccaatccgcgcggccccctgaacaacaaggcggtggccggc
cagtatccgccgggctccaccttcaagatgctggtgatgctggcggcgctggaatccggg
ttggcggggcccgacaccaagttcttctgtccgggccacctggaactcggcgatacccgg
ttccactgctggtcgcgctacggccacggctgggtcgacatgaagcagtcgatcgcccag
agctgcgacgtctactactacgagctcgccaagcgcatcgggatcgaccggatcgcggcc
atcgccaagcgcttcggcctcggcgacgtgaccggggtcgatattccgggcgagcggcgc
ggactggtcccgacccgcgagtggaagctggcgaccaccggcgtgccctggcagatgggc
gagacgctggtggcggcgatcgggcaggggttcaacctcaccacgccgctgcaactcgcc
ttgatgacggcgcgcctcgtcaatggcggcaaggcggtggtgccccatcttgagattccc
gacggccccctgccgccggccgaggacatggccgtcgacagccggcatctggatgccgtc
cgggcggcgatgtcggaagtggtcaacggtccgcgcggcacggcgcgcaagatccagggc
gacaaggacgacatcaaactggcgggcaagaccggcacggcccaggtccggcgcatcacc
atggccgaccgggcgtcgggcgcctacaaggacgagaaaccctggcgctaccgcgatcac
gcgctcttcgtcgggttcggtccggtcgaggcgccgcgttacgccgtggcggtggtggtc
gagcatggcggcggcgggtcgtcgatggccgcaccgatcggggccgacgtgctgcgcgaa
gcgctgcggatcgatccgcctgcccctccggggccgaccgcgtccgacagcaaggacgac
gacgaaccggctcggcgggacgggtga
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