Thalassobaculum sp. OXR-137: T8K17_02120
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Entry
T8K17_02120 CDS
T09627
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
thar
Thalassobaculum sp. OXR-137
Pathway
thar00300
Lysine biosynthesis
thar01100
Metabolic pathways
thar01120
Microbial metabolism in diverse environments
thar01230
Biosynthesis of amino acids
Module
thar_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
T8K17_02120 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
thar01002
]
T8K17_02120 (dapE)
Enzymes [BR:
thar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
T8K17_02120 (dapE)
Peptidases and inhibitors [BR:
thar01002
]
Metallo peptidases
Family M20
T8K17_02120 (dapE)
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GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
WPZ34948
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Position
complement(435500..436693)
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AA seq
397 aa
AA seq
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MSASPQAGSASAGSASSARLDPVEVAADLIRCPSVTPEEGGALDLLQSLLEPMGFACHRL
RFEAEGTPAIDNLYARRGTEAPHLCFAGHTDVVPVGDMGAWTKGPFDGTIADDRLWGRGA
ADMKGGIAAFVAAVDRYLSSSAGKGSISLLITGDEEGPAVNGTTKVLDWMEANGEIPDMC
IVGEPTNPSAMGDMMKIGRRGSFTGHITVHGTQGHVAYPHLAENPVHNLIRLLEPFAHGT
LDEGTAHFPPTTLSVTTIDVGNPATNVIPAEARATFNVRFNDAHSAESLEKMFRGSFDQK
GVRYEMTTECSGESFVTEPGALSDLISDATFAVTGRRPELSTTGGTSDARFIKRLCPVVE
FGLVGQTMHKVDEHVAVADIRTLTDIYADVLNRALGR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgtccccccaagccggctcggcgtccgccggctctgcgtcgtcggcgcgcctc
gacccggtcgaggtcgccgcggacctgatccgctgccccagcgttaccccggaagagggc
ggtgccctcgacctgctgcagtccctgctggagccgatgggcttcgcctgccatcggctg
cggttcgaggcggaggggaccccggcgatcgacaatctctacgcgcgccgcggcaccgag
gcgccgcacctctgcttcgccggccataccgacgtggtgccggtcggcgatatgggcgcc
tggaccaaggggccgttcgacgggacaattgccgacgaccggctctggggccggggggcg
gccgacatgaagggcggcatcgccgccttcgtcgccgcggtcgaccgttacctgtcctcc
agcgcgggcaagggctcgatcagcctgctgatcaccggcgacgaggaaggccccgccgtc
aacggcaccaccaaggtgctggactggatggaggccaacggcgagatccccgacatgtgc
atcgtgggcgagccgaccaatccgagcgccatgggcgacatgatgaagatcggccggcgc
ggctccttcaccggccacatcacggtgcatgggacccaggggcacgtcgcctatccgcat
ctggccgagaacccggtccacaacctgatccgactgctggagcccttcgcccacggcacc
ctggacgagggcacggcgcatttcccgccgaccaccctgtcggtgaccaccatcgatgtc
ggcaacccggcgaccaacgtcatcccggcggaggcgcgcgccaccttcaacgtgcgcttc
aacgacgcccattccgcggagtcgctggagaagatgttccggggcagcttcgaccagaag
ggcgtgcgctacgagatgacgacggaatgctcgggcgagagtttcgtcaccgaacccggg
gcgctctcggatctgatctcggacgccaccttcgccgtgaccggccgccgcccggagctc
agcaccaccggcggcacctctgacgcccgcttcatcaagcggctctgcccggtggtggag
ttcgggctggtcggccagaccatgcacaaggtcgacgagcatgtggccgtcgccgatatc
cgcacgctcaccgatatctacgcggacgtgctgaaccgcgcgctgggtcgttag
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