Thalassobaculum sp. OXR-137: T8K17_02620
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Entry
T8K17_02620 CDS
T09627
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
thar
Thalassobaculum sp. OXR-137
Pathway
thar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T8K17_02620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thar03019
]
T8K17_02620
Messenger RNA biogenesis [BR:
thar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
T8K17_02620
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Lon_lid
Motif
Other DBs
NCBI-ProteinID:
WPZ35041
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All DBs
Position
544330..544821
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AA seq
163 aa
AA seq
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MTDRSDLPLRPCVGIVMFNEDGKVFVGKRIGMENAWQMPQGGIDPGETPREAGLRELEEE
IGTRAVELIAETADWIDYEFPADLPGKIRENWRGQTQKWLACRFTGIAQDIDLQTEHPEF
DAWKWVDAATVVELIVPFKRATYEAVMAELGPVIEDATARRLP
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgaagcgacctgcccctgcgcccctgtgtggggatcgtgatgttcaacgaa
gacggcaaggtcttcgtcggcaagcgtatcgggatggagaatgcctggcagatgccccag
ggcgggatcgatccgggcgagacgccccgggaggccggtctgcgcgagctggaggaggag
atcggcacccgggcggtggagttgatcgccgagacggcggattggatcgactacgagttt
cccgccgatctgcccggcaagatccgcgagaactggcgcggccagacccagaaatggctc
gcctgccggtttaccggcatcgcgcaggatatcgacctgcagaccgagcatccggaattc
gatgcctggaaatgggtcgatgcagcgaccgtcgtcgagctgatcgtgccgttcaaacgc
gccacctacgaagcggtgatggccgagctggggccggtgatcgaggacgcaaccgcccga
cgattgccgtga
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