Thalassobaculum sp. OXR-137: T8K17_02795
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Entry
T8K17_02795 CDS
T09627
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
thar
Thalassobaculum sp. OXR-137
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thar03016
]
T8K17_02795 (thpR)
Enzymes [BR:
thar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
T8K17_02795 (thpR)
Transfer RNA biogenesis [BR:
thar03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
T8K17_02795 (thpR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
WPZ35076
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All DBs
Position
583192..583815
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AA seq
207 aa
AA seq
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MPRLFVALDLPETVKDALGDLQVGLPEARWHDIDDFHLTLRFIGEVDPATETELVETLDL
LDGPAVAVIPRGYGHFERKGKPAVLYVAAEPTQELAALQRRVESLVRGCGVSPDPRRFTP
HITLARFPRSIEADRVGRWLETAPTPQIPPFTVDAVTLYRSRRQPEGARYEPLHRFPLDS
LPDEDSTGWAGYPHGDDGDSDGDGEAC
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcctgttcgtcgccctcgatcttcccgaaaccgtcaaggacgcgctcggcgac
ctgcaggtgggcctgcccgaagcccgctggcacgatatcgacgacttccacctgaccctg
cgcttcatcggcgaggtggatcccgccaccgaaaccgagctggtcgaaaccctcgacctg
ctggacggcccggccgtcgccgtgattccgcgcggctacggccatttcgagcgcaagggc
aagccggcggtgctctacgtcgccgccgagccgacacaagaactcgccgccctgcagcgc
cgggtggaaagcctggtccgcggctgcggcgtctcccccgacccgcgccgtttcaccccg
cacatcaccctcgcgcgcttccccaggagcatcgaggcggaccgggtcggccgctggctg
gagaccgcgccgacgccgcagatcccgcccttcaccgtcgatgcggtgaccctctaccgc
agccgccgccagccggagggcgcgcgctacgagccgctgcaccgcttcccgctggacagc
ctgccggacgaggacagcaccggctgggccggatatccgcacggcgatgacggggactcg
gacggggacggtgaagcctgttag
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