Thalassobaculum sp. OXR-137: T8K17_04050
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Entry
T8K17_04050 CDS
T09627
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
thar
Thalassobaculum sp. OXR-137
Pathway
thar03030
DNA replication
thar03410
Base excision repair
thar03420
Nucleotide excision repair
thar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T8K17_04050 (polA)
03410 Base excision repair
T8K17_04050 (polA)
03420 Nucleotide excision repair
T8K17_04050 (polA)
03440 Homologous recombination
T8K17_04050 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thar03032
]
T8K17_04050 (polA)
03400 DNA repair and recombination proteins [BR:
thar03400
]
T8K17_04050 (polA)
Enzymes [BR:
thar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T8K17_04050 (polA)
DNA replication proteins [BR:
thar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
T8K17_04050 (polA)
DNA repair and recombination proteins [BR:
thar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
T8K17_04050 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
T8K17_04050 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WPZ35319
LinkDB
All DBs
Position
863166..865988
Genome browser
AA seq
940 aa
AA seq
DB search
MADTCAPAVPTPTEPGQSHLFLVDGSGYIFRAYHALPPMSRRDGTPVNAVFGFSNMLVKL
IDDMDADHMAVIFDASRFSFRNDIYPQYKAQRPDAPEDLVPQFPLIREATRAFNAPCIEM
DGFEADDIIATYARQAVEQGWRVTIVSSDKDLMQLVRPGVDMFDPMKNVAIGPDQVMEKF
GVAPNKVVDVQALAGDSVDNVPGVPGIGVKTAAQLIGEYGDLETLLERAGEIKQPKRREN
LIEHAELARISKQLVTLKDDVNVPEPLGDLVVRGIDSDKILAFLREQNFKRLIARFESEA
GQAAGETASTAAVSAPTGEAAGYELVTDMAALQGWIAAAEAQGAVAFDTETTSLNAMRAE
LVGVSLALAPGRACYIPLRHVGSAAQGELLSAPSAGDNPEQVPFEPAIAALKWLFENPAV
LKIAHNAKYDCLVLSRKSNGGIAVAPLDDTMCASYVLEGGLHGHGLDELSLLHFEHRNIK
FEEVCGKGKSQIGFAEVPLDRARDYAAEDADMAWRLHQVLRPRLVDEHMTTVYETLERPL
IPVLVDMERNGIRVDPKILNDMSADFAKRLVEREGEIHALAGEPFNVASPKQLGEILFDK
MGIPGGKKGKTGAYSTGADVLEALAAQGIELAEKVLDYRQIAKLKSTYTDALVGDINPET
NRVHTSYSMTGAATGRLSSNDPNLQNIPIRTEEGRKIRTAFVAEPGNLLLSVDYSQIELR
LVADIAGLETMRAAFREGIDIHAQTASEVFGVPLSEMTPDIRRKAKAINFGIIYGISGFG
LARQLGTPQGEAQQYINAYFERFPGIRDYMDEMKRRAHEWGFVETRFGRKVHINAIREKN
PAMRNFGERAAINAPIQGTAADIIKRAMVRLPVALQRANSKARMLLQVHDELLFEVPEGD
VEATAALVKEVMEGAAAPVLKLSVPLVAEAGWGESWATAH
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacctgcgcccccgccgtcccgacccccaccgaaccggggcagagccacctc
ttcctggtggacgggtcgggctacattttccgcgcctatcacgccctgccgcccatgagc
cggcgggacggaacgccggtgaacgcggtgttcggcttctccaacatgctggtgaagctg
attgacgacatggatgccgaccacatggcggtgatcttcgacgccagccggttcagcttc
cgcaacgacatctaccctcagtacaaggcccagcgccccgacgcgccggaggatctggtc
ccgcaattcccgctgatccgcgaagcgacccgcgccttcaacgcgccctgcatcgagatg
gacgggttcgaggccgacgacatcatcgcgacctatgcccgccaggcggtggagcagggc
tggcgcgtcaccatcgtgtcttccgacaaggacctgatgcagctcgtgcggcccggcgtc
gacatgttcgacccgatgaagaacgtggcgatcggcccggatcaggtgatggagaagttc
ggcgtcgccccgaacaaggtggtcgacgtccaggcgctggccggcgacagcgtcgacaac
gtgcccggggtgcccggcatcggcgtcaagaccgccgcccagctcatcggcgaatacggc
gacctggagacccttctggagcgcgcgggggagatcaagcagcccaaacggcgcgagaac
ctgatcgaacatgccgagctggcccgcatctccaagcagctcgtcaccctgaaggatgac
gtgaacgtgccggagccgctgggcgacctggtggtccgcgggatcgattccgacaagatt
ctggccttcctgcgcgagcagaacttcaagcggctgatcgcccggttcgaaagcgaggcc
ggacaggccgccggcgagaccgcgtccaccgccgccgtctccgctccgaccggtgaggcg
gccggctacgagctggtgaccgacatggcggcgctgcagggctggatcgccgcggcggag
gcccagggggcggttgctttcgacaccgaaacgacctcgctcaacgccatgcgggccgag
ctggtgggcgtgtccctcgccctggcaccgggcagggcctgctacatccccctgcgccat
gtgggttccgccgcccagggcgagctgctctccgccccctccgccggcgacaacccggag
caggtgccgttcgagccggccatcgccgcgctgaagtggctgttcgagaatccggcggtc
ctgaagatcgcccacaacgccaaatacgactgcctggtgctgagccggaaatccaatggc
ggcatcgcggtggcaccgctcgacgacaccatgtgcgcctcctacgtgctggagggcggg
ctgcacggccatgggctcgacgagctgtcgctgctgcatttcgagcatcgcaacatcaag
ttcgaggaggtctgcggcaagggcaagagccagatcggcttcgccgaagtgccgctcgac
agggcccgggactatgccgccgaggacgcggacatggcgtggcgcctgcatcaggtgctg
cgcccgcgcctggtcgacgagcacatgacgacggtctacgagaccctggagcggccgctg
atcccggtgctggtcgacatggagcgcaacggcatccgggtcgacccgaagatcctgaac
gacatgtcggccgatttcgccaagcgcctggtcgagcgcgagggcgagatccacgccctg
gccggcgagccgttcaacgtcgcctcccccaagcagctcggcgagatcctgttcgacaag
atgggcattcccggcggcaagaagggcaagaccggcgcctacagcaccggcgccgacgtg
ctggaggcgctcgccgcccagggcatcgagctggcggagaaggtgctcgactaccgccag
atcgccaagctgaagtcgacctataccgacgcgctggtgggcgacatcaacccggagacc
aaccgggtgcacacctcctattcgatgaccggtgcggccaccggccggctgtcctccaac
gacccgaacctgcagaacatcccgatccgcaccgaggaggggcgcaagatccgcaccgcc
ttcgtcgccgagccgggcaacctgctgctctcggtcgactactcgcagatcgagctgcgg
ctggtcgccgacatcgccgggctggagaccatgcgtgccgccttccgcgagggcatcgac
atccacgcccaaaccgcctcggaggtgtttggtgtgccgctgtcggagatgacgccggac
atccgccgcaaggccaaggcgatcaatttcggcatcatctacggcatttccggcttcggc
ctggcgcgccagctcggcacgccccagggcgaggcgcagcaatacatcaacgcctatttc
gagcgcttccccggcatccgcgactacatggacgagatgaagcggcgggcgcacgaatgg
ggcttcgtggagacccggttcggccgcaaggtccatatcaacgcgatccgcgagaagaac
ccggcgatgcggaacttcggcgagcgcgcggcgatcaacgcgccgatccagggcacggcc
gccgacatcatcaagcgcgccatggtgcgcctgccggtcgcgctgcagcgggcgaactcc
aaggcccggatgctgctgcaggtgcatgacgaactgctcttcgaggtgcccgagggcgac
gtcgaagcgaccgctgccctggtgaaggaagtgatggagggggccgccgccccggtcctg
aagctgtcggtcccgctggtcgccgaggccggctggggcgagagctgggccaccgcgcat
tga
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