Thalassobaculum sp. OXR-137: T8K17_04510
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Entry
T8K17_04510 CDS
T09627
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
thar
Thalassobaculum sp. OXR-137
Pathway
thar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T8K17_04510 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thar03400
]
T8K17_04510 (xth)
Enzymes [BR:
thar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
T8K17_04510 (xth)
DNA repair and recombination proteins [BR:
thar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
T8K17_04510 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WPZ35409
LinkDB
All DBs
Position
963973..964764
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AA seq
263 aa
AA seq
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MRIVTWNINSVRLRLPLVLRLLQELQPDVLCLQETKAIVDVFPGAALAEAGWPHQLVAGM
KGYNGVAIVSRLPIEETVSREFCGRTDARHVAARIDDGPEVHNFYVPAGGDVPDPAVNDK
FAHKLEFLAEMTTWLGTDRSPDHPMILVGDLNIAPLETDVWSHKQLLNVVSHTPVEVEAL
DKVQASAGWIDAVRKIVPPEERLYSWWSYRAKDWSAADKGRRLDHVWVTPPLDGGIRHAE
VIRDARGWEKASDHAPVVVDLDL
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgcggatcgtcacctggaacatcaactccgtccgcctgcgcctgccgctggtgctgcgc
ctcctccaggagctgcagcccgacgtcctgtgcctgcaggagaccaaggcgatcgtcgac
gtgttccccggtgccgccctggccgaggccggctggccacaccagctcgtcgccggcatg
aagggctataacggggtcgccatcgtctcccgcctgcccatcgaggagacggtctcgcgc
gagttctgcggacgcaccgacgcgcgccacgtggccgcccggatcgacgacgggccggag
gtgcacaatttctacgtccccgccggcggcgacgtgccggacccggcggtgaacgacaag
ttcgcccacaagctcgagttcctggccgagatgaccacgtggctcggcaccgaccgcagc
ccggatcacccgatgatcctggtcggcgacctgaacatcgcgccgctggagaccgacgtg
tggtcccacaagcagcttctcaacgtggtcagccatacgccggtggaggtcgaggcgctg
gacaaggtccaggcgtcggccggctggatcgacgcggtgcgcaagatcgttcccccggag
gaacggctgtactcctggtggagctaccgggccaaggactggtcggcggcggacaagggc
cggcgactggaccatgtctgggtgaccccgccgctcgacggcggcatccgccatgccgag
gtcatccgcgacgcccgcggctgggagaaggcctccgaccacgccccggtggtggtggac
ctggatctgtag
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