Thalassobaculum sp. OXR-137: T8K17_04865
Help
Entry
T8K17_04865 CDS
T09627
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
thar
Thalassobaculum sp. OXR-137
Pathway
thar03030
DNA replication
thar03430
Mismatch repair
thar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T8K17_04865 (holA)
03430 Mismatch repair
T8K17_04865 (holA)
03440 Homologous recombination
T8K17_04865 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thar03032
]
T8K17_04865 (holA)
03400 DNA repair and recombination proteins [BR:
thar03400
]
T8K17_04865 (holA)
Enzymes [BR:
thar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T8K17_04865 (holA)
DNA replication proteins [BR:
thar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
T8K17_04865 (holA)
DNA repair and recombination proteins [BR:
thar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
T8K17_04865 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Ago_Mid
Motif
Other DBs
NCBI-ProteinID:
WPZ35477
LinkDB
All DBs
Position
1042765..1043814
Genome browser
AA seq
349 aa
AA seq
DB search
MKVAANGVERFVKDPPPGVRAVLVYGPDTGKVLEFAKRIARTAVDNLDDPFNVCELDGDD
ATGDPARLSDEMRARSLMGGRRLVRLRNAGDKCSDAIVNALDGDTGDTLLVVEAGDLKPA
GGLRKLFEGKREDIAGLACYADSGRDLATMVRETLSTGSVKIDPDAERFLIEHLGGDRMA
SRMEVEKLTLLAGSGQTIDLNLVVSAIGDSAALDIDALIAAAAEGRPDAIMTGLDRAFRQ
GEASVRIIRMAITYFQRLHLARARMADGRNPVDAVKSLRPPIFFRTADAMARQLQRWDLR
SLASALARLGEAEIRCKTTGFPDEAECGQAMIDVARMAVMAGRRAGARR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggcggccaacggtgtggagcggttcgtcaaggatccgccgccgggggtccga
gccgtgctggtctacggtcccgataccggcaaggttctcgaattcgccaagcgcatcgcc
cgcaccgccgtcgacaatctcgacgacccgttcaacgtctgcgaactcgacggcgacgac
gccacgggcgacccggcccgcctctccgacgagatgcgggcccgctcactgatgggcggc
cggcgtctcgtccgcctgcgcaatgccggcgacaaatgcagcgacgcgatcgtcaacgcg
ctcgacggcgataccggcgacacccttctcgtggtcgaggccggcgacctgaagcccgcc
ggcggtctgcgcaagctgtttgagggcaaacgcgaggatatcgccggacttgcctgctat
gcggatagcggacgcgacctggcgaccatggtgcgggaaaccctgtccacgggctccgtc
aaaatagatccggacgccgaacggttcctcatcgagcacctgggcggcgaccggatggcg
agccgaatggaggtcgaaaagctcacccttttggcgggatctgggcagacgatcgatctc
aatctggttgtttcggccatcggagatagcgcagcactggatattgacgcgctgattgcc
gccgcagccgaaggacggcccgacgcgatcatgaccgggctcgatcgggcgttccgccag
ggcgaggcgtcggtccggatcatccggatggcgatcacctatttccagcggctgcatctg
gcccgcgcgcgcatggccgacgggcgcaatccggtggacgcggtgaagtcgcttcggccg
ccgatcttcttccggaccgccgacgcgatggcccggcagcttcaacgctgggatctgcgc
agcctcgcctccgccctcgcccggctgggcgaagcggagatccgctgcaagaccacgggc
tttccggacgaggccgaatgcggccaggccatgatcgacgtggcgcggatggcggtgatg
gccggccgtcgcgccggcgccagacggtaa
DBGET
integrated database retrieval system
