Thalassobaculum sp. OXR-137: T8K17_07220
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Entry
T8K17_07220 CDS
T09627
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
thar
Thalassobaculum sp. OXR-137
Pathway
thar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T8K17_07220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thar02000
]
T8K17_07220
Transporters [BR:
thar02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
T8K17_07220
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
DdrB
Motif
Other DBs
NCBI-ProteinID:
WPZ35923
LinkDB
All DBs
Position
1541311..1542477
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AA seq
388 aa
AA seq
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MNQVEFTRRHMMALMGTAATAAMLPSVAGAADEALKFWAPGIARVGEKDWSSMEKEAGIK
LANVAKSARADESIQKMVVGDGNALYDAMTDNGGGMEDALASQNAIAEIDTSKIPNWSII
EKRYLDGGDAADTIRYEGKVYAIPYISNADALAFNYDVIGQELTSWEVLFDEQFKGRAAL
QNDFGPTLTNTAIYLKQSGKQDIDNPSDMSEDEVKGVCQFLIDKKKAGQFRTFWDGFQNG
VDLLASEEVLVASCWEPVQIVAAKKAGKDIRYGTMKEGHQTWNNIVMMTRGGLERGMDET
FYKLANLYLSPWFGARTLAGLGFTPQMTGVLEYVDANPDTFDAETKALMNDRLARKKERI
AVPGNSWQNVFPTNMRAYQDWWSRVQAA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggttgagttcacccgccgccatatgatggcgttgatgggaacggccgcgacc
gcggcgatgctgccgagtgtcgccggtgccgccgacgaggcgctgaaattctgggcgccg
ggcatcgcccgggtcggcgagaaggattggagctcgatggagaaggaggccggcatcaag
ctggccaatgtcgccaagagtgcccgcgccgacgagtcgatccagaagatggtggtcggt
gatggcaacgccctctacgacgccatgaccgacaacggcggcggcatggaggatgcgctg
gcgagccagaacgccatcgccgagatcgacacctcgaagatcccgaactggtcgatcatc
gagaagcgctacctggacggcggcgacgcggcggacaccatccgctacgagggcaaggtc
tacgccatcccctacatctccaacgccgacgcgctggccttcaactacgacgtcatcggc
caggagctgacctcctgggaggttctgttcgacgagcagttcaagggccgcgccgccctg
cagaacgacttcggtccgaccctgaccaacacggcgatctacctcaagcagtcgggcaag
caggacatcgacaacccgtccgacatgtccgaggacgaggtgaagggcgtgtgtcagttc
ctgatcgacaagaagaaggccggccagttccgcaccttctgggacgggttccagaacggc
gtcgacctgctggcctccgaagaggtgctggtcgcctcgtgctgggagccggtgcagatc
gtcgccgccaagaaggcgggcaaggacatccgctacggcacgatgaaggagggtcaccag
acctggaacaacatcgtcatgatgacccgcggcggccttgagcgcggcatggacgagacg
ttctacaagctggcgaacctgtacctgtctccgtggttcggcgcgcgcaccctggcgggt
ctcggcttcacgccgcagatgaccggggtgctggaatacgtggacgccaatccggacacc
ttcgatgccgagaccaaggcgctgatgaacgaccgcctggcccgcaagaaggagcggatc
gcggttcccggcaactcctggcagaacgtgttcccgacgaacatgcgcgcctatcaggac
tggtggtcccgggtacaggctgcctga
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