Thalassobaculum sp. OXR-137: T8K17_09120
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Entry
T8K17_09120 CDS
T09627
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
thar
Thalassobaculum sp. OXR-137
Pathway
thar00061
Fatty acid biosynthesis
thar00071
Fatty acid degradation
thar01100
Metabolic pathways
thar01212
Fatty acid metabolism
thar02024
Quorum sensing
thar04146
Peroxisome
Module
thar_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
T8K17_09120
00071 Fatty acid degradation
T8K17_09120
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
T8K17_09120
09145 Cellular community - prokaryotes
02024 Quorum sensing
T8K17_09120
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
thar01004
]
T8K17_09120
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thar04147
]
T8K17_09120
Enzymes [BR:
thar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
T8K17_09120
Lipid biosynthesis proteins [BR:
thar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
T8K17_09120
Exosome [BR:
thar04147
]
Exosomal proteins
Exosomal proteins of breast milk
T8K17_09120
Exosomal proteins of breast cancer cells
T8K17_09120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WPZ36298
LinkDB
All DBs
Position
1935708..1937636
Genome browser
AA seq
642 aa
AA seq
DB search
MAYPDPAVYDTLPKLLKHNVDHHGSDIAVREKDLGIWHESTWAEYGAKVKHIALAIRDLG
VTRGDVVAMIGDNDSDWTAFEIAGHAAGAMTMGIYRDALEEEVGYLAEYAEVKLVYAEDQ
EQVDKFLSLADRLPTLRHIVYADDRGMRKRSDPRLIHLDTLIAAGIEADRKAPGAFDAMV
AATKGEDVAILCTTSGTTSNPKLAMLPHGRFVRHMHTYLAADPKGPHDEYVSVLPLPWIM
EQVYVFGFSLVSRMKINFPESEETSFADLREIGPTFLLLAPRVLEQIAADMRARMMDASS
LNQWLFDKGLKIAVEAVEQGRHSSLANMMVMGALRDRLGFANVTSAATGGAAMGPDTFKL
FLAMGVPLKQLYGQTETLGAYTLQDGKELDVDTVGIPFEGCEVTIENPDPEGVGEIVTRH
PNMFIGYYKNPESTAADLRDGWMHTGDAGYFDAKGRLTVIDRLKDMAETSTGVKFSPQYI
ENKLKFSPYVGEAVILGSGKPFLTAIICVRFSTVSKWAEKNRVGFTSYAGLSADERIYEL
IRGEVEGVNAGLPEHQRIRRFLLLYKELDADDGELTRTRKVRRGVVGERYGQIIDGLYGD
AGTARLDTEVTFEDGRRTRVQADMKIMQVEAGSSAGTLRKAG
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcatatcccgatccggcggtttacgacacgctgccgaaactccttaagcacaatgtc
gaccaccacggctccgacatcgccgtccgcgagaaggatctcgggatctggcacgagtcc
acctgggccgagtacggcgccaaggtgaagcatatcgcgctggccatccgcgacctgggc
gtgacccggggcgacgtggtcgccatgatcggcgacaacgacagcgactggaccgccttc
gagatcgccggccatgccgcgggcgcgatgaccatgggcatctaccgcgacgcgctggag
gaggaggtcggctacctcgccgaatatgccgaggtgaagctggtctatgccgaggatcag
gagcaggtggacaagttcctctcgctcgccgaccggctaccgaccctgcgccacatcgtc
tatgccgacgaccgagggatgcggaagcgctccgatccccggctgatccatctcgacacg
ctgatcgccgccggcatcgaggccgaccgcaaagcgccgggcgcgttcgacgccatggtc
gccgccaccaagggcgaggacgtggcgatcctgtgcaccacctccggcacgacctccaac
ccgaagctggcgatgctgccccacggccggttcgtgcggcacatgcatacctatctggcc
gccgatcccaagggaccgcacgacgagtacgtctcggtgctgccgctgccctggatcatg
gagcaggtctacgtcttcggcttcagtctggtgtcgcggatgaagatcaatttcccggag
agcgaggagaccagcttcgccgatttgcgggagatcggaccgaccttcctgctgctcgct
ccgcgggtgctggagcagatcgccgccgacatgcgcgcccggatgatggacgcctcgtcc
ctgaaccagtggctgttcgacaagggcctgaagatcgccgtcgaggcggtcgagcagggt
cggcattcgagcctggcgaacatgatggtcatgggcgcgctgcgcgaccggctgggcttc
gccaatgtgacctcggcggcgaccggcggtgcggcgatggggccggacaccttcaagctg
ttcctcgccatgggcgttccgctgaaacagctctacggccagaccgagaccctgggcgcc
tataccctgcaggacggcaaggaactcgacgtcgatacggtcggcatccccttcgagggc
tgcgaggtgacgatcgagaaccccgatcccgagggcgtgggcgagatcgtgacccgccac
ccgaacatgttcatcggctactacaagaaccctgaatcgaccgccgccgatctgcgcgac
ggctggatgcataccggcgatgccggctatttcgacgccaagggccggctcaccgtgatc
gaccggctcaaggacatggcggagacctccacgggggtgaagttctcgccgcaatacatc
gagaacaagctgaagttctccccctatgtgggcgaggcggtgatcctggggtcgggcaaa
ccgttcctgaccgcgatcatctgcgtgcggttctccaccgtctccaaatgggccgagaag
aaccgggtgggtttcacttcctatgccggactgtcggcggacgagcggatctacgagctg
atccgcggcgaggtcgagggggtcaatgccggcctgccggagcaccagcgcatccgccgc
ttcctactcctctacaaggaactggacgccgatgacggcgagctgacccgcacccgcaag
gtgcggcgcggcgtggtgggcgagcgctacggccagatcatcgacgggctctacggcgat
gccggcactgcgcgcctcgacaccgaggtgaccttcgaggacggccggcgcacccgggtc
caggcggatatgaagatcatgcaggtcgaggcgggatcctcggccggcaccctcagaaag
gcgggctga
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