Thalassobaculum sp. OXR-137: T8K17_09245
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Entry
T8K17_09245 CDS
T09627
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
thar
Thalassobaculum sp. OXR-137
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thar03400
]
T8K17_09245 (addA)
Enzymes [BR:
thar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T8K17_09245 (addA)
DNA repair and recombination proteins [BR:
thar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
T8K17_09245 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
Motif
Other DBs
NCBI-ProteinID:
WPZ36321
LinkDB
All DBs
Position
complement(1967448..1970906)
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AA seq
1152 aa
AA seq
DB search
MSVIDSVSAVEEATRNQREAADPSVSAWVAASAGSGKTKVLTDRLLNLLLAGTKPQRLLC
LTFTKAAAAEMATRLSRTLAKWTVLDADALGKELEALDGRVASQDRMAKARRLFAEVLDA
PGGLKIQTIHAFAQSLLGRFPLEAGVPPNFRLADDRAAASLLEDAERTVLERARSGADGD
LADALAVVTERAAEQTVRDLLKTMLVQRTRLTRSVEAAGGVDAIAARLHATFGTDPDQTD
WTLRRVASEDGAFDRDALHDAASALAAGGKTDAKRADALFAWLALPDGDARAVAWDDYKR
ALLTQEGTVQARLATKGVQERAPSVVDDLTREAERILEVEERRKALDTALRSAALIRLST
AIIDAYATAKSRRALLDFEDLVERARRLLAAPGTAGWVLFKLDEGLEHILIDEAQDTSPA
QWEIVRALAEEFFSGIGAAAERAPDRPRTIFAVGDVKQSIYSFQGADPAGFTRARLHFAA
RVTAAEQRFRDVQMQVSFRSTAAVLGAVDAVFAREDARQGVAEVVAGVAREIAHRASRTG
QAGRVELWPVIEPMDEEEADFWSPPLTRAAMDAPVTRLAQRVAGRIAGWIASGEILEAQN
RPIRPGDVMVLVRRRGAFVAELVRALKAAGVPVAGVDRMVLTEQMAVRDLIALGEALLLP
DDDLTLATVLKSPLVGLSEDDLLDLAQGRRERRLWAELWRRAEERDVFARAARRLARWTT
MARHLPPHAFYQQILSAERGRERLVARLGPDCEDAIDEFLAQALDDERENPPSLQSFLHA
VATSAQEVKRELEGGEVDQVRVMTVHGAKGLQAPIVILPDTVRPPQLRDAVVWHADGIDL
PLWAPSSASADAVSAGARAKAREAMEEEYRRLLYVAMTRAEDRLIVCGWKGKRDPIDKGW
FGHARAGLPGLATEDADGTLVLATPQEAALPAAKAEAAATGPAPLPAWATADAPREPTPP
RPLAPSRPASDEPPVRSPLQRDGTDPFKRGVLLHRLLQLLPDMEPARRREAGRALLARPV
HALSTDQVEAWLEEVLAVLDDPGFAPVFAPGSRAEVPIVGQVTGPDGLQIVSGRIDRLAV
GPDAVLIVDYKTNRPPPSSINAVADTYMRQMATYRSLVASLYPGREVRCALLWTDGPTLM
PIPDHLLQGFGA
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcatcgactcggtcagtgcagtcgaggaagccacccgcaaccagcgcgaggcc
gccgatccgtcggtctccgcctgggtcgcagcctccgccggctccggcaagaccaaggtg
ctgaccgaccggctgctgaacctgctgctggccggcaccaagccgcagcggctgctctgc
ctgaccttcaccaaggcggcggcggcggaaatggcgacccgcctgtcgcgcaccctggcg
aaatggaccgtgctcgacgccgacgctctcggcaaggaactggaagccctggacggccgg
gttgcgagccaggaccgcatggccaaggcgcgccgcctgttcgccgaggtgctggatgcg
ccgggcgggctgaagatccaaaccatccacgccttcgcccagtccctgctcggccgcttc
ccgctcgaggccggcgtgccgccgaacttccgtctggccgacgaccgggcggcggcgagc
ctgctggaggatgccgagcgcaccgtgctcgaacgggcgcgcagcggggccgacggcgat
ctggccgacgcgctcgccgtggtgaccgagcgggcggcggagcagaccgtgcgcgacctg
ctgaagaccatgctggtccagcgcacccgcctgacccgctcggtggaggccgccggcgga
gtcgacgcgatcgccgcccggctgcacgccaccttcggaaccgacccggaccagaccgac
tggaccctgcgccgggtggccagcgaggacggcgccttcgaccgggacgccctgcacgac
gcggcgagcgcgctggcggccggcggcaagaccgacgccaagcgggccgacgccctgttc
gcctggctcgccctgcccgacggcgatgcccgggcggtggcctgggacgactacaagcgc
gcgctgctgacccaggagggcacggtccaggcccggctcgcgaccaagggggtgcaggag
cgcgcgccgagcgtggtcgacgacctgacgcgggaggcggagcggatcctggaggtggag
gagcggcgcaaggccctggacaccgccctgcgctcggccgccctgatccggctgtccacc
gccatcatcgacgcctatgccaccgccaagtcccgccgtgccctgctcgatttcgaggat
ctggtggaacgggcccgccggctgctagccgcccccggcaccgccggctgggtgctgttc
aagctggacgaggggctggagcacatcctgatcgacgaggcccaggacaccagcccggcc
caatgggagatcgtgcgcgcgctcgccgaggagttcttctccggcatcggcgccgccgcg
gagcgcgccccggaccggccccgcaccatcttcgccgtgggcgacgtcaagcagtcgatc
tacagcttccagggtgccgacccggccggcttcacccgggcgcgcctgcatttcgccgcg
cgggtcaccgccgccgagcagcgcttccgcgacgtgcagatgcaggtctccttccgctcc
accgcggcggtgctgggggcggtggatgcggtcttcgcccgcgaggacgcccgccagggc
gtggccgaggtggtggccggcgtcgcccgcgagatcgcgcaccgggccagccgcaccggc
caagcgggacgggtcgagctctggccggtgatcgagccgatggacgaggaggaggccgat
ttctggtcgccacccctgacccgcgccgccatggacgcgccggtcacccgcctggcccag
cgtgtcgccggccgcatcgccggctggatcgcctcgggcgagatcctggaagcgcagaac
cggccgatccggccgggcgacgtcatggtgctggtccgccgccgcggcgccttcgttgcc
gagctggtgcgggcgctgaaggccgccggcgtgccggtggccggcgtcgaccgcatggtg
ctgaccgaacagatggcggtgcgcgacctgatcgcgctcggcgaggcgctgctgctgccc
gatgacgatctcaccctcgccacggtgctgaagagcccgctggtcgggctgagcgaggac
gacctgctggacctcgcccagggccgccgggagcgccgtctgtgggccgagctgtggcgc
cgggctgaggagcgcgacgtctttgcccgggctgcccgacggctcgcccgctggacgacc
atggcccgtcacctgccgccgcatgccttctaccagcagatcctgtcggccgagcgcggc
cgcgagcggctggtcgcccggctcggccccgactgcgaggacgcgatcgacgagttcctg
gcccaggccctggacgacgagcgcgagaacccgccctcgctgcagagcttcctgcacgcg
gtcgccaccagcgcccaggaagtgaagcgcgagctggagggcggcgaggtcgaccaagtc
cgggtcatgaccgtgcacggggccaagggcctgcaggcgccgatcgtcatcctgcccgac
accgtgcgcccgccgcagcttcgcgacgccgtcgtgtggcatgccgacggcatcgacctg
cccctgtgggcgccgtccagcgccagcgccgatgccgtgtccgccggtgcgcgggcgaag
gcgcgcgaggcgatggaggaggagtaccgccgcctgctctatgtcgccatgacccgggcc
gaggaccggctgatcgtctgcggctggaagggcaagcgcgatccgatcgacaagggctgg
ttcggccatgcccgcgccggactgccgggtctcgccaccgaggatgcggacggcaccctg
gtcctggccaccccgcaggaggccgccctgcccgccgccaaggcggaagcggcggcgacc
ggtccggctcccctgcccgcctgggccacggccgacgcgccgcgcgagccgaccccgccg
cgcccgcttgccccgtcccgcccggcctcggacgagccgccggtgcgctcgccgctgcag
cgcgacggcaccgacccgttcaagcgcggcgtgctgctgcaccggctgcttcagcttctg
cccgacatggagcccgcccgccgacgcgaggccggccgcgccctgctcgcccgcccggtc
catgccctgagtaccgatcaggtcgaggcctggctggaggaggtgctggcggtgctggac
gatcccggattcgccccggtcttcgctcctggctcccgcgccgaggtgccgatcgtcggt
caggtcaccggaccggacgggctgcagatcgtctccggccggatcgaccggcttgccgtc
ggcccggacgcggtgcttatcgtcgattacaagaccaatcggccacccccgtcttcaatt
aacgccgtggccgacacatatatgcgccagatggccacctatcggtcgctggtggcctcc
ctatatcccggtcgtgaggtgcgttgtgccctgctttggaccgacggaccgaccctaatg
ccgataccggaccacttgcttcaagggtttggtgcatag
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