Thalassobaculum sp. OXR-137: T8K17_09520
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Entry
T8K17_09520 CDS
T09627
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
thar
Thalassobaculum sp. OXR-137
Pathway
thar00521
Streptomycin biosynthesis
thar00523
Polyketide sugar unit biosynthesis
thar00525
Acarbose and validamycin biosynthesis
thar00541
Biosynthesis of various nucleotide sugars
thar01100
Metabolic pathways
thar01110
Biosynthesis of secondary metabolites
thar01250
Biosynthesis of nucleotide sugars
Module
thar_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
T8K17_09520 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
T8K17_09520 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
T8K17_09520 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
T8K17_09520 (rfbB)
00525 Acarbose and validamycin biosynthesis
T8K17_09520 (rfbB)
Enzymes [BR:
thar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
T8K17_09520 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
NAD_binding_10
Gp_dh_N
NmrA
Motif
Other DBs
NCBI-ProteinID:
WPZ36375
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All DBs
Position
2028329..2029411
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AA seq
360 aa
AA seq
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MATPKTVLVTGGAGFIGSAVIRLLIAETDVRVVNVDKLTYAASGTALAEIEDSNRYAFEQ
VDITDSAALKTVFETHDPDAVMHLAAESHVDRSIDGPEAFIHTNVVGTFRLLQAARQHFA
TLEGERKAGFRFHHISTDEVFGSLGDEGMFTEETAYDPRSPYSASKASSDHLVRAWGETY
GLPIVLSNCSNNYGPFHFPEKLIPLMIIKGLRGEPLPVYGDGQNVRDWLYVEDHARALWT
VLSKGTAGESYNIGGHNEMSNLAVVQTICDLLDRYAPPLAGVTSRRELITFVTDRPGHDF
RYAIDAAKIERDLGWTPRETFESGIGKTVQWYLANESWWQPLLDRNVLARVGTGTTGKTG
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaccgaaaacggttctggtcacgggcggcgccggcttcatcggctccgcggtc
atccgcctgctgatcgccgagaccgacgtccgggtggtcaatgtcgacaagctgacctac
gcggccagcggcaccgccctggcggagatcgaggacagcaaccgctacgccttcgagcag
gtggacatcaccgactcggcggcgctgaagacggtgttcgagacccacgatcccgatgcg
gtgatgcatctggcggcggaatcccatgtcgaccgctcgatcgacgggcccgaggcgttc
atccacaccaacgtggtcggcactttccgcctgctgcaggcggcgcgccagcatttcgcc
acgctggagggcgagcgcaaggccggcttccggttccaccacatctcaaccgacgaggtg
ttcggctcgctcggcgacgagggcatgttcaccgaggagacggcctacgatccgcggtcg
ccctattccgcatccaaggcctcctcggaccatctggtgcgcgcctggggcgagacctac
gggctgccgatcgtcctgtcgaactgctcgaacaactacgggccgttccacttccccgag
aagctgatcccgctgatgatcatcaagggcctgcgcggcgagccgctgccggtctatggc
gacggtcagaacgtgcgcgactggctctatgtggaggaccacgcccgcgccctgtggacc
gtgctgtcgaagggcactgccggcgagagctacaacatcggcggccacaacgagatgtcg
aacctcgcggtggtgcagaccatctgcgacctgctggaccgctacgcgccgccgctggcc
ggcgtgacgtcccggcgcgaactgatcaccttcgtcaccgaccggcccggccacgacttc
cgctatgccatcgacgccgccaagatcgagcgcgatctcggatggaccccgcgcgagacc
ttcgaaagcggcatcggcaagaccgtgcagtggtatctggccaacgagtcctggtggcag
ccgctgctggaccgcaacgtgctggcccgcgtgggcaccggcaccaccggaaagacaggc
tga
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