KEGG   Thalassobaculum sp. OXR-137: T8K17_12600
Entry
T8K17_12600       CDS       T09627                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
thar  Thalassobaculum sp. OXR-137
Brite
KEGG Orthology (KO) [BR:thar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:thar03400]
    T8K17_12600
Enzymes [BR:thar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     T8K17_12600
    5.6.2.6  RNA 3'-5' helicase
     T8K17_12600
DNA repair and recombination proteins [BR:thar03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    T8K17_12600
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 PSD4
Other DBs
NCBI-ProteinID: WPZ36968
LinkDB
Position
complement(2671038..2673509)
AA seq 823 aa
MNHTPPLPALPPAFQAWFAAKGWAAHPHQLEMLAAARAGRSALLIAPTGGGKTLAGFLAS
LVELAEDPKAGLHTLYISPLKALAVDIHRNLTAPIEEIGLAVTAETRTGDTPASKRQRQR
RKPPHILLTTPESLALLLSYPDAGEIFAGLRCVVVDELHALAGTKRGELLALALARLGTL
APEARRVGLSATVAHPAALEAYLSKTGQAPAEDVTVVRGGEAAQAEVKILLPGGEKDEDR
LPWAGHMGLYAIDRIYAAIQAHRTTLVFVNTRAQAELIFQALWHANEDHLPIALHHGSLA
AEQRRKVEAVMAKGGLRAVVATSSLDLGIDWAAVDLVLQVGAPKGTSRLLQRIGRANHRL
DTPSRALLVPANRFEVLECKAALDAMRAGELDGDPPRPGGLDVLAQHVLGTACAAPFDPS
ELYAEVITASPYAELDRETFDAVVEFVRTGGYALKVYDRFQRIRPNADGRLEVADKRVAQ
SYRMNVGTIVEAVTVKVRMGRGRILGEIEEYFVQWLRPGDTFLFAGRLLTFQGMRENFVD
CTPGGEGEPAVPAYMGGKLPLTTQLAHRVRGMLEDSASWPTLPGPVEEWLELQRWRSVLP
KADSLLVETFPRADREYLVAYTFAGRNAHQTLGMLLTRRMERMGLGPLGFVATDYVIAVW
SVKACADVDTLFDQDMLGDDLEEWMAESSLLKRTFRNVAVIAGLIERKLPGHEKTGRQVT
FNADLIYDVLRKHQPDHILLQATREDAARGLTDIRRLSDLLVSVQGRIVHRRLDRVSPLA
VPILLEVGKEQVAGGAIEALMDDFAESLIEEAIGGDMQASLQL
NT seq 2472 nt   +upstreamnt  +downstreamnt
atgaaccacaccccgcccctgcccgccctgccgcccgcctttcaggcgtggttcgcggcc
aagggatgggccgcccatccgcaccagcttgagatgctcgccgccgcccgggccgggcgg
tcggcgttgctgatcgcgccgaccggcgggggcaagacgctggccgggtttctcgcctcg
ctggtcgaactggccgaagacccgaaggcggggctgcacacgctgtacatctcgccgctg
aaggcgctggcggtcgatatccaccgcaacctcaccgccccgatcgaggagattggcctc
gccgtcaccgcggagacccgcaccggcgacacccccgcctccaaacgccagcgccaacgc
cgcaagccgccgcatatcctgctgaccacgccggaaagcctcgccctgctgctgtcctat
ccggatgcgggcgagatcttcgccgggctgcgctgcgtggtggtggacgagctgcacgcg
ctggccggcaccaagcggggtgagctgctggccctggcgctggcccggctcggcaccctg
gcgcccgaggcccggcgggtcgggctgtcggccaccgtcgcccatccggccgccttggag
gcctatctgtcgaagaccggccaggcaccggccgaagacgtcaccgtcgtgcgcggtggc
gaggcggcgcaggcggaggtgaagatcctgctccctgggggcgaaaaggacgaagaccgc
ctgccctgggccgggcatatggggctctacgccatcgaccggatctacgccgcgatccag
gcgcaccgaaccactctggtcttcgtgaacacccgcgcccaggctgagctgatcttccag
gccctgtggcatgccaacgaggaccacctgcccatcgccctgcaccacggctcgctggcg
gcagagcagcggcgcaaggtggaggcggtgatggccaagggggggctgcgcgccgtggtc
gccacctcctccctcgatctcggcatcgactgggccgccgtcgacctggtgctgcaggtg
ggcgcgccgaagggcacctcgcggctgctgcagcgcatcggccgggccaaccaccggctg
gacaccccgtcccgcgccctgctggtccccgccaaccggttcgaggtgctggaatgcaag
gccgcgctcgacgccatgcgggcgggcgagctggacggcgatccgccgcgccccggcggg
ctcgacgtgctggcccagcacgtgctcggcaccgcctgcgccgctccgttcgatccgtca
gagctttatgccgaggtgatcaccgcctcgccctatgccgagctcgaccgcgagaccttc
gacgcggtggtggagttcgtgcgcaccggcggctatgcgctgaaggtctacgaccggttc
cagcgcatccgccccaatgccgacggaaggctggaggtggcggacaagcgggtggcccaa
tcctaccgcatgaatgtcggcaccatcgtcgaggcggtgaccgtgaaggtgcggatgggg
cgcggccgcatcctgggcgagatcgaggagtatttcgtccagtggctccgcccgggcgac
accttcctgttcgccggccggctgctgaccttccagggcatgcgcgagaatttcgtcgac
tgcacccccggcggcgagggcgagcccgccgtgccggcctatatgggcggcaagctgccg
ctgaccacccagctcgcccaccgggtgcggggcatgctggaggacagcgcgtcctggccc
accctgccgggaccggtggaggaatggctggagctgcagcgctggcgctcggtcctgccc
aaggccgacagcctgctggtggagaccttcccgcgggccgaccgggaatacctggtcgcc
tataccttcgccgggcgcaacgcccaccagaccctgggcatgctgctgacccggcggatg
gagcgcatggggctgggaccgctcggattcgtcgccaccgactacgtcatcgcggtgtgg
tcggtgaaggcttgcgcggacgtggacaccctgttcgatcaggacatgctgggcgacgac
ctggaggaatggatggcggaatcctccctgctcaagcgcaccttccgcaacgtcgccgtc
atcgccgggctgatcgagcgcaagctgccgggccatgagaagaccggccgtcaggtgacc
ttcaacgccgacctgatctacgatgttctgcgcaagcatcaacccgatcacatcctgctg
caggcgacccgggaggatgcggcgcgggggctgaccgacatccgccggctgtccgacctg
ctggtcagcgtgcagggccggatcgtccaccgccggctcgaccgggtgtcgccgctggcg
gtgccgatcctgctggaggtcggtaaggaacaggtcgccggaggcgcgatcgaagcgctg
atggacgacttcgccgaaagcctcatcgaggaggcgatcggcggcgacatgcaggccagc
ctgcagctctag

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