Thalassobaculum sp. OXR-137: T8K17_16510
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Entry
T8K17_16510 CDS
T09627
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
thar
Thalassobaculum sp. OXR-137
Pathway
thar03030
DNA replication
thar03430
Mismatch repair
thar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T8K17_16510 (dnaE)
03430 Mismatch repair
T8K17_16510 (dnaE)
03440 Homologous recombination
T8K17_16510 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thar03032
]
T8K17_16510 (dnaE)
03400 DNA repair and recombination proteins [BR:
thar03400
]
T8K17_16510 (dnaE)
Enzymes [BR:
thar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T8K17_16510 (dnaE)
DNA replication proteins [BR:
thar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
T8K17_16510 (dnaE)
DNA repair and recombination proteins [BR:
thar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
T8K17_16510 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WPZ32837
LinkDB
All DBs
Position
3569494..3572985
Genome browser
AA seq
1163 aa
AA seq
DB search
MTHADFVHLRVHSAYSLAEGAIHAKQLVKLAKQNNMPAVAMTDSGNMFGALEFAVTASGE
GVQPIVGVQLNIRRPVDTEQRGLRVVGGRDVLPDQLPLIAQNEAGYRNLMSLVSRAFLDG
TGEEAPQISLDDMEGRTDGLIALTGGLKGGLGRLLLEGRRTDAEAMLTRLEALFPGRLYI
ELQRHFLEDENRIEGPLIDLAYARDLPLVATNDVFFADPGMHEPQDVLLCIAQSTTIGNP
KRWRVTPHHRFKTAEEMRELFADLPEALDNTLVIARRCAVMPEKLAPILPRFDTEGGRTE
AEELRAQAEGGLEGRLAAHVYTPEMDAAAREEAAKPYRERLAMELGIIEQMGFPGYFLIV
SDFIKWAKAKNIPVGPGRGSGAGSLVAYSLLITDLDPLRWGLLFERFLNPERVSMPDFDI
DFCQDRRDEVIRYVQEKYGRDRVAQIITFGKLQARAALRDVGRVLEMPYGQVDRICKLVP
NNPANPVTLEQALQTEQELRAQRDADENVANLIKTALKLEGLYRNSSTHAAGVVIGDRPL
DHLVPLYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLQRAVDHLKERGIEIDLS
QVPLDDGPTYAMLAKGESTGVFQLESSGMRDVLRRLRPDRFEDIIALVALYRPGPMANIP
KYIACKHGEEQPDYMHPVLEPVLKETFGIMIYQEQVQQAAQRLSGYTLGGADLLRRAMGK
KIKEEMDAQREKFVNGAVEQGVDKGQASGIFDQIAAFAGYGFNKSHAAAYALVSYHTAYL
KANYPVEFLAASMTYDMGNTDKLNVFRQELQKLKIELLPPDINKSRRDFAVEKLEDGRYG
IRYALAAVKNVGGSAMDALVEMREADGPFKSLSDFADRADPTQVNKRLLENLVRAGAFDQ
LHKNRAELFESLETVVRHVSLAASERKSNQVSLFAVDGGTPQEQDIRLKRRPEWPQMDRL
KEEFDALGFYLSAHPLDAYAESLARLEVVSSTEAQAAAARKGGQTRLVLAGIVVGRQIRT
SKSGNRFAFAQLTDRTGVFEVTMFSEVLAASRDLLDSGEPLLVRADARIEDDNLRLLASS
VEPLDKAVERTAAGLEIFLHDTSPLETLKSLIQNEGRGRGRIHVVVPTARGDVRIKLPEA
YQVSSRLRGAVKALPGIDYVKDL
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgccgatttcgtccatctccgtgtgcattccgcctattccctggcggaaggg
gcgattcacgccaagcagctcgtgaagctggcaaagcagaacaacatgcccgccgtcgcc
atgaccgacagcggcaacatgttcggcgcgctggaattcgcggtgacggcgtcgggcgag
ggggtgcagccgatcgtcggcgtgcagctcaacatccgccggccggtcgacaccgaacag
cgcggcctgcgggtcgtcggcggccgcgacgtgctgccggaccagctcccgctgatcgcc
cagaacgaggccggctaccgcaacctgatgagcctggtcagccgggccttcctcgacggc
acgggggaggaggcgccgcagatctccctggacgacatggaggggcgcaccgacggcctg
atcgccctcacgggcggcctgaagggcggcctgggccggttgctgctggaggggcgccgc
accgacgcggaggccatgctgacgcggctggaggccctgttcccggggcggctctatatc
gagctgcagcgccacttcctggaggacgagaaccggatcgagggaccgctgatcgacctc
gcctatgcccgcgatctgccgctggtggcgaccaacgacgtgttcttcgccgatccgggc
atgcacgagccccaggacgtgctgctgtgcatcgcccagagcacgaccatcggcaatccc
aagcgctggcgcgtgaccccgcatcaccgcttcaagacggcggaggaaatgcgcgagctg
ttcgccgacctgccggaggcgctcgacaacactctcgtcattgcccggcgctgcgcggtg
atgccggagaagctggcgccgattctaccgcgcttcgacaccgagggcggccgcaccgag
gccgaggaactgcgcgcccaggccgagggggggctggaaggccggctcgccgcgcatgtc
tatacccccgagatggacgcggcggcccgcgaggaggcggcgaagccgtatcgcgagcgg
ctggcgatggagctcgggatcatcgagcagatgggcttccccggctacttcctgatcgtg
tcggacttcatcaaatgggcgaaggccaagaacatcccggtcgggccgggccgcggatcg
ggtgccggctcgctcgtcgcgtattcgctgctgatcaccgatctggacccgctgcgctgg
gggctgctgttcgagcgcttcctgaaccccgaacgcgtgtccatgcccgacttcgacatc
gacttctgccaggaccgccgcgacgaggtgatccgctacgtgcaggagaaatacggccgc
gaccgggtcgcccagatcatcaccttcggtaagctccaggcccgtgccgccctgcgcgac
gtcggccgggtcctggaaatgccctacggccaggtcgaccggatctgcaagctggtgccg
aacaatccggccaatccggtcaccctggaacaggcgctgcagaccgagcaggagctgcgg
gcgcagcgcgacgccgacgaaaacgtcgccaacctgatcaagaccgcgctcaagctggag
gggctgtacagaaactcctcgacccacgccgccggcgtggtgatcggcgaccggccgctc
gaccatctggtgccgctctaccgcgacccgcgctccgacatgccggtcacccagttcaac
atgaaatgggtcgagcaggcggggctggtgaagttcgacttcctgggcctgaagacgctg
accgtgctgcagcgggccgtcgatcacctgaaggagcgggggatcgagatcgacctgtcc
caggtgccgctcgacgacgggccgacctacgccatgctggccaagggcgagagcaccggc
gtgttccagttggaaagttcgggcatgcgcgacgtgctgcgccgcctgcgccctgaccgc
ttcgaggacatcatcgcgctcgtggccctgtaccggccgggcccgatggccaacatcccg
aaatacatcgcctgcaagcacggcgaggagcagccggactacatgcacccggttctggag
ccggtgctgaaggagaccttcggcatcatgatttaccaggagcaggtgcagcaggcggcc
cagcggctctcgggctacacgctgggcggcgccgacctgctgcgccgggccatgggtaag
aagatcaaggaggagatggacgcccagcgcgagaaattcgtgaacggcgccgtcgagcag
ggcgtggataagggtcaggccagcggcatcttcgaccagatcgccgccttcgccggttac
ggcttcaacaagtcccacgccgccgcctatgccctggtcagctatcacaccgcctatctg
aaggcgaactacccggtcgagttcctggccgcgtcgatgacctatgacatggggaacacc
gacaagctgaacgtgttccgtcaggaattgcagaagcttaagatcgaactcctgccgccg
gacatcaacaagtcgcgccgcgatttcgcggtcgagaagctggaggacggccgctacggc
atccgctatgcccttgccgccgtgaagaatgtcggcggctcggccatggacgcgctggtg
gagatgcgcgaggcggacggcccgttcaagagcctgtccgacttcgccgaccgggccgac
ccgacccaggtcaacaaacgtctgctggagaatctggtccgcgccggtgccttcgatcaa
cttcataagaaccgcgcggaactatttgaaagccttgagacagtcgtgcgtcacgtcagc
ctcgcggcgagcgagcgcaagtccaaccaggtgagcctcttcgccgtcgacggcggcact
ccgcaggaacaggacatccgactgaagcgccgtccggaatggccgcagatggaccggctg
aaggaggagttcgacgccctcggcttctacctctccgcccatccgctcgacgcctatgcc
gagagcctggcgcggctggaggtggtctcctccaccgaggcccaggcggcggcggcgcgc
aagggcggacagacacggctggtgctggccggcattgtggtcggccggcagatccggacc
tccaagtccggcaaccgcttcgccttcgcccagctcaccgaccgcaccggcgtgttcgag
gtcaccatgttctccgaggtgctggccgcgtcccgggatctgctggattcgggcgagccg
ctgctggtccgcgccgacgcgaggatcgaggacgacaacctgcgcctgctggcctcctcg
gtggagccgctggacaaggcggtggagcgcaccgccgccgggctggagatcttcctgcac
gacacctcgcccctggagacgctgaagagcctgatccagaacgagggcaggggccgcggc
cgcatccacgtggtggtcccgaccgcccgcggcgacgtccgcatcaagctgccggaggct
taccaggtgtcgagccgcctgcgcggcgcggtgaaggcactgccggggatcgactacgtg
aaggatctttag
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