Thalassobaculum sp. OXR-137: T8K17_19085
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Entry
T8K17_19085 CDS
T09627
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
thar
Thalassobaculum sp. OXR-137
Pathway
thar02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
T8K17_19085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thar02000
]
T8K17_19085
Transporters [BR:
thar02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
T8K17_19085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Glyco_hydro_57
RNA_polI_A34
Motif
Other DBs
NCBI-ProteinID:
WPZ33330
LinkDB
All DBs
Position
complement(4080229..4081284)
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AA seq
351 aa
AA seq
DB search
MSLNILKKAGLAVAATAFLMSAGAGDAEAKKVRWKMHSAFGTNVAVLGPVGVRITDWVNK
ISDGDFDIKLFEPGALAGGYAYYDPISQGAFDAAYGTPGANQGKNSAFAFLSTWPFGPGA
LEFNAWLQYGGGVEIGKELYGRDGIEYFYCGMIPPETSGWFREPIENLDQLKGLKMRFFG
VGAKVMQKLGVSTQQLAGGDIYPALELGTIDATEFSMPAIDRSYGFYQIAKYNYFPGWHQ
QSTTNEVLVNRANWEKLEDVKKAQFEVACKANIGVELAEGEALQPAAMIANQKEGVTNVT
WSDEVLNTLREKWEEVLQEELAANPDVQKLWDSYTAFHEEYKVWGEMGYLK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgaatatcctgaaaaaggcagggttggcggttgccgccactgcgttcctgatg
tctgccggggcgggcgacgccgaagcgaaaaaagtgcgttggaaaatgcactcggcgttc
ggcacgaacgtggcggtgctgggtccggtcggcgtgcgtatcaccgactgggtcaacaag
atctcggacggcgatttcgacatcaagctgttcgagccgggcgcgcttgcgggcggctac
gcctattacgacccgatcagccagggcgcgttcgacgccgcctacggcacgccgggtgcc
aaccagggcaagaactcggccttcgcgttcctgtccacctggccgttcggtccgggcgcc
ctcgagttcaatgcgtggctgcagtacggcggcggcgtcgagatcggcaaggagctctat
ggccgcgacggcatcgagtacttctactgcggcatgatcccgccggagacctcgggctgg
ttccgtgagccgatcgagaacctcgaccagctgaagggcctgaagatgcgcttcttcggc
gtcggcgcgaaggtcatgcagaagctcggcgtgtccacccagcagcttgccggcggcgac
atctacccggctctggaactcggcacgatcgacgcgaccgaattctcgatgcctgccatc
gaccggtcctacggcttctatcagatcgcgaagtacaactacttcccgggctggcaccag
cagtcgacgaccaacgaggtcctggtcaaccgggccaactgggaaaagctggaagacgtg
aagaaggcccagttcgaggtcgcttgcaaagccaatatcggcgtcgagctggccgagggc
gaggcgcttcagccggcggcgatgatcgccaaccagaaggaaggcgtgaccaacgtcacg
tggtccgacgaggtcctgaacacgctgcgcgagaagtgggaagaggtccttcaggaggaa
ctcgccgcgaaccccgacgtccagaaactctgggacagctacacggctttccacgaggag
tacaaggtctggggtgagatgggttacctcaagtaa
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