Thalassobaculum sp. OXR-137: T8K17_20180
Help
Entry
T8K17_20180 CDS
T09627
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
thar
Thalassobaculum sp. OXR-137
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
thar01002
]
T8K17_20180
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thar01011
]
T8K17_20180
Peptidases and inhibitors [BR:
thar01002
]
Cysteine peptidases
Family C82
T8K17_20180
Peptidoglycan biosynthesis and degradation proteins [BR:
thar01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
T8K17_20180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
WPZ33542
LinkDB
All DBs
Position
4333715..4335247
Genome browser
AA seq
510 aa
AA seq
DB search
MTVQIKIQSAVVGLLALLLALAAPAVAQTPDPEAVVEAFLAARGDGHAWVEETEVPTLNA
KGAAVVRVLERAERQGLRPSDYTLPAVDTPDALDREVGRALLRYLTDLQAGRIAPKKADP
DLYVFRREVDGLALLEAVHAAPETAKAMADLAPGNPIYRRLRRLLLDYRALAKAGGWPAV
PEGPTLKPGMTDPRVSAVRHRLAATADLTPVPGASDLYDPALESAVRQFQRRHGLDSDGA
VGAKTVAAMNVPVENRIRQIVLNMERFRWMPDDFGDDHVFVNMAGFELDYVVGGVSRLTM
RVIIGRPYRETPIFSDRIRYLEFNPTWSVPAKIAAEDLLPKIKKDPSYLTSGGYELYAGY
QNDAPRIDPATVNWSSIPKGRFPYRLRQAPGEKNALGQVKFMFPNQFDVYLHDTPARDLF
AKSVRNFSSGCIRLQKPITLSEVMLAADGQDPAQVRKILDSKKTTRVNLKTPVAVHLTYL
TAWIGEGGTAEFRDDIYGRDPLLAKALGLR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgacagtccagatcaagatccaatccgccgtcgtcggcctgctggcgcttctcctggcc
ctggcggcgcccgccgtggcgcagacgccggatccggaggccgtcgtcgaggcgtttctg
gcggctcgcggcgacgggcacgcctgggtggaggaaaccgaggttcccaccctcaacgcc
aagggtgctgccgtcgtccgggtcctggaacgggccgagcgtcagggcctgcgcccgtcc
gactacaccctgcccgcggtcgacacgccggatgccctggaccgggaggtcggccgggcc
ctgctgcgctacctgaccgacctgcaggccggacgcatcgccccgaagaaggccgacccc
gacctgtacgtgttccggcgcgaggtcgacggtctcgcccttctggaggcggtgcacgcc
gcgccggagaccgccaaggcgatggccgatctggcgccgggcaatccgatctaccgtcgc
ctgcgccgtctgctgctggactaccgggcgctggccaaggccggcggctggcccgcggta
ccggaggggccgaccctgaagcccggcatgaccgacccgcgtgtctccgccgtccgtcac
cggttggccgccacggcggacctcaccccggtcccaggcgcctccgatctgtacgacccg
gccctggaaagcgcggtgcgccagttccagcgccgccacgggctcgattcggacggcgcg
gtcggcgccaagaccgtggccgccatgaacgtcccggtggagaacaggatccggcagatc
gtcctgaacatggaacggttccgctggatgccggacgatttcggcgacgaccacgtcttc
gtcaacatggccgggttcgagctcgactatgtggtcggcggggtctcccggctgaccatg
cgggtgatcatcggccgcccctatcgcgagacgccgatcttcagcgaccggatccgatat
ctggagttcaacccgacctggagcgtgccggcgaagatcgcggccgaggatctgctgccg
aagatcaagaaggacccgagctacctgacctccggcggctacgagctctatgccggctat
cagaacgacgcgccgcggatcgatccggcgacggtgaactggtcctcgatcccgaagggc
cggttcccttatcgcctgcgccaggcgccgggggagaagaacgcgctcggccaggtgaag
ttcatgttccccaaccagttcgacgtctacctgcacgacacgccggcgcgcgacctcttc
gccaagtcggtgcgcaatttcagttccggctgcatccggctgcagaagccgatcacactg
tcggaggtgatgctggcggcggacggccaggaccccgcacaggtccgcaagatcctcgac
agcaagaagacgacacgggtcaacctgaagacccccgtggccgtccatctgacctatctg
acggcctggatcggcgagggtgggacggccgaattccgcgacgatatctacgggcgggac
cccctcctggccaaggccctgggtttgcgctga
DBGET
integrated database retrieval system
