Thalassobaculum sp. OXR-137: T8K17_22310
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Entry
T8K17_22310 CDS
T09627
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
thar
Thalassobaculum sp. OXR-137
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
thar01002
]
T8K17_22310
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thar01011
]
T8K17_22310
Peptidases and inhibitors [BR:
thar01002
]
Cysteine peptidases
Family C82
T8K17_22310
Peptidoglycan biosynthesis and degradation proteins [BR:
thar01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
T8K17_22310
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WPZ33960
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All DBs
Position
complement(4807576..4809456)
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AA seq
626 aa
AA seq
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MLYSRSLLAGLVAGSSLLMTVSSAAGQHAMPVSLAVPSETDVAALPLAEMLGDPAGGDLT
GDIERLVMQGFLETGLSADIGDSAVQAGRMAYAQDLFQPIWSKAGAESLIRLNENLLAYG
LPVDPDGGEAVAQVVERRFDAPSDADRARADIELTAIWLRIAAAVSGGLEDEGAAVASLA
NQPARSLLTTALRRAGEGDAIGTLTPFEPESAQYKGLKKALHQYIDIQSRGGWYAIPDGD
LVREGDHDSRIPQLRARLQAEGYAIAWETEADRDDPAPTPTDSGRPLVEVALKDGAAEDG
AIAERAADLMADPTELDAPLVATLKDFQSRHGLEPDGVVGPMTLAALNESVESKVGRIVR
AMEQWRSQGALGERYVWANIPSFTAEGWNAGRREIRMKTVVGMPSRETPIFSDQIEYTVA
NPKWYVPVSIARRDKLPKLIEDATYADRKGFTVYERSTGLQVSSSAVNWRDPGAVNRYRL
VQNPGSSNALGELKIIFPNRHSVYLHGTPSTSLFKRASRAFSSGCVRLERPVAMANWLAS
HDTRASEAQIRRAVASGENRHIRFGAPIPVHLTYVTVTVDDEGVPNFWRDIYKRDDQIHF
VERYAPPEIQTTASVALDSMGPKPAD
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgctctattccagatccctcttggccggacttgtcgccggatcgtccctgctcatgacc
gtgtcgtccgcagccgggcagcatgccatgccggtctccctggccgtgccgtcggagacc
gacgtggcggccctgcccctggcggaaatgctgggcgatcccgcgggcggagatctgacc
ggcgatatcgaacgcctggtgatgcagggcttcctggaaaccggcctcagcgcggatatc
ggcgacagtgccgttcaggcgggccgcatggcctatgcccaggacctcttccagccgatc
tggtcgaaggcgggggcggagtcgctgatccggctgaacgagaaccttctggcatacggt
cttccggtggacccggatggcggtgaggcggttgcccaagtggtcgagcggcgcttcgac
gctccgagcgatgcggatcgcgcccgggccgacattgagctgacggcgatctggctgcgc
attgccgcggcggtgagcggcggattggaggacgagggtgccgcggttgcgtctctcgcc
aatcagccggcgcgctctctgctgacaaccgcgcttcggcgcgcaggcgagggtgacgcg
atcggcacgctgaccccgttcgaaccggagagcgcccagtacaagggtctcaagaaggcg
ctgcaccaatacatcgatatccaaagccgcggcgggtggtacgccattcccgacggcgat
ctggtccgcgagggcgaccatgattcccgcatcccccagctgcgggcccgcttgcaggcc
gaaggctatgcgattgcctgggagaccgaggcggaccgggacgaccctgcgcccactccg
accgacagcggccgtcctcttgtcgaggtggccctgaaggacggcgcggcggaggatggc
gcgatcgccgaacgggcggccgacctgatggccgatccgaccgagttggatgcgcctctg
gtggcgaccctgaaggacttccagtcccgtcacgggctcgagccggacggggtggtcggc
ccgatgaccctcgccgcgctcaacgagagcgtcgagtccaaggtcggtcggatcgtgcgg
gcgatggagcagtggcgcagccagggggcgctcggcgagcgctatgtctgggccaatatc
ccgtccttcacggccgagggctggaacgcgggccgtcgggaaatccggatgaagaccgtc
gtcggcatgccgtcccgcgagacgccgatcttctccgaccagatcgaatacacggtggcc
aatccgaaatggtacgtgccggtgagcatcgcccgccgggacaagctgccgaagctcatc
gaagatgccacctatgccgaccgcaagggtttcaccgtctatgagcggagcaccggcctg
caggtcagttcctctgcggtgaactggcgcgatccgggcgcggtcaaccggtatcgcctg
gtccagaacccgggttcctcgaacgcgctgggcgagttgaagatcatcttcccgaaccgc
cattcggtctatctccacggaacgccgagcacatcgctgttcaagcgggccagccgggcc
ttcagttcgggctgtgtgcgcctcgagcgcccggtggccatggcgaactggctcgcctcc
cacgatacgcgggcaagcgaggcgcagatccggcgggcggtcgcgtccggcgagaaccgg
cacatccgcttcggggcgccgatcccggtccatctgacgtatgtgaccgtcacggtggac
gatgaaggggttccgaatttctggcgggacatttacaagcgcgacgatcagattcatttc
gtcgagcgttatgccccgccggagatccagaccacggcgagcgtcgccctcgacagcatg
ggaccgaagccggctgattga
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