Thalassobaculum sp. OXR-137: T8K17_23535
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Entry
T8K17_23535 CDS
T09627
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
thar
Thalassobaculum sp. OXR-137
Pathway
thar02020
Two-component system
thar02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
T8K17_23535
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
T8K17_23535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
thar02022
]
T8K17_23535
02035 Bacterial motility proteins [BR:
thar02035
]
T8K17_23535
Two-component system [BR:
thar02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
T8K17_23535
Bacterial motility proteins [BR:
thar02035
]
Flagellar system
Flagellar assembly proteins
Others
T8K17_23535
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Response_reg
AAA
AAA_16
AAA_19
AAA_3
MCM
ADH_zinc_N
Mg_chelatase
HTH_50
AAA_22
nSTAND3
ATPase
AAA_2
AAA_7
HTH_28
AAA_18
SLFN-g3_helicase
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
WPZ34192
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All DBs
Position
5077691..5079130
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AA seq
479 aa
AA seq
DB search
MRLLIVGTLEGHISAAGQIALQRGAKVSHVDGIEAGLKILREGPGADLTMVDIRQPVAKM
LKQMKQERINCPVVACGVQSDPDAAVAAIRAGAKEYMPLPPNAELIAAILAAVAEEQTAV
IFRDPIMAGVLKLADQIAPSDASVLITGESGTGKEVLARYVHTKSRRSNEKFVSVNCAAI
PDNLLESELFGHEKGAFTGAVAKRIGKFEEAHGGTLLLDEISEMDIRLQAKLLRAIQERE
IDRVGGSSPVKVDIRLIATSNRDLERHVQNGHFREDLYFRLNVFNLQLPALRDRPGDIRA
LAAHFAKKYAEANGMPERALSEAALARLETHTWRGNVRELENTLHRAVLLAHGDEIGLEA
IMLTGEGMTPASPTPAFSSAPRTEAAAPSAAPSSAAPAPSAPASEPAAPVTDTGGLVGRT
VADVERHLIIDTLSHCLGNRTHAANILGISIRTLRNKVKQYTDEGFEVPSPGDGDRVAG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgttgatcgtcggaaccctggaaggccatatcagcgcggccggccaaatcgcg
ttgcagcgcggtgcgaaggtcagccatgtggacggcatcgaagccggactgaagatcctg
cgcgaggggccgggcgcggacctgaccatggtcgatatccgccagcccgtcgccaagatg
ctcaagcagatgaagcaggagcggatcaactgcccggtcgtggcctgcggcgtgcagtcc
gatccggatgccgccgtcgccgcgatccgcgccggcgccaaggaatacatgcccctgccg
ccgaatgccgagctgatcgccgccatcctggccgccgtggccgaggagcagaccgccgtc
atcttccgcgacccgatcatggcgggcgtgctcaagctcgccgaccagatcgcgccgtcg
gacgccagcgtgctgatcaccggcgaatccgggaccggtaaggaagtcctggcccgctac
gtccacaccaagtcgcgccgttcgaacgagaagttcgtctcggtgaactgtgccgcgatc
ccggacaacctgctggaatccgagctgttcggccacgagaagggagccttcaccggcgcc
gtcgccaagcgcatcggcaagttcgaggaagcccatggcggcacccttctgctggacgaa
atcagcgagatggacatccgcctgcaggccaagttgctgcgcgcgatccaggaacgcgag
atcgaccgggtcggcggcagttcgcccgtgaaggtggacatccgcctgatcgcgacgtcg
aaccgcgacctggaacgccacgtccagaacggacacttccgcgaggatctgtatttccgc
ctcaacgtcttcaacctccagcttccggccctgcgcgaccggccgggcgacatccgcgct
ttggcggcccatttcgccaagaaatacgccgaggccaacgggatgccggagcgcgcgctg
agcgaagccgccctcgcccgcctggagacgcatacctggcgcggcaacgtgcgcgagctg
gagaacaccctgcaccgcgccgtcctgctggcccatggcgacgagatcgggttggaggcg
atcatgctgaccggcgagggtatgacccccgcctcgcccaccccggccttctccagcgcg
cccaggaccgaagcggcggctccgtctgccgccccctcttcggcggcccccgcgccttcg
gctccggcctccgagccggccgcgccggtcaccgacaccggcgggctggtcgggcgcacg
gtcgccgatgtggagcgccacctgatcatcgacaccctgtcccattgcctgggcaaccgg
acccatgccgcgaacattctcggcatctcgatccgcaccctgcgcaacaaggtcaagcag
tacaccgacgaaggcttcgaggtgccgtcgccgggcgacggcgaccgggtcgcgggctaa
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