KEGG   Thalassobaculum sp. OXR-137: T8K17_24610
Entry
T8K17_24610       CDS       T09627                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
thar  Thalassobaculum sp. OXR-137
Pathway
thar03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:thar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    T8K17_24610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:thar03400]
    T8K17_24610
DNA repair and recombination proteins [BR:thar03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     T8K17_24610
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: WPZ34402
LinkDB
Position
5313595..5314491
AA seq 298 aa
MPISARAIWKGQLRLSLVSIPVELYSATDRRARISLRQFHEPSGERIRYEKTVPGIGPVD
TDEIIKGYEVEDEFIPVTQEELDEIKLESRKTVELVQFVGACEIDPIYFDKPYYVVPQDE
LSEDAFRVLRDALKESEKIGIGQMTLRGREYLVAVKNCGNGLLLETLHYEEEIRKTDSFF
AELDSSSAEEDLLKVARDLIASKSEKFDAGAFKDRYSTELRKLIDRKAKGKTPIAKGGKS
SGGSTGGDNVIDLMSALKKSLADSGGSRKRSTKAPAKSSGKSSAKKSKSGSSPSRKAS
NT seq 897 nt   +upstreamnt  +downstreamnt
atgcccatctccgcccgtgccatctggaaaggtcagttgcggctgtcgctcgtctccatt
ccggtcgagctctattccgccaccgaccgccgcgcccgcatcagcctgcgccagttccat
gaaccgagcggcgaacggatccgctacgagaagaccgtccccggcatcggtccggtcgat
accgacgagatcatcaagggctacgaggtcgaggacgagttcatcccggtcacccaggaa
gagctggacgagatcaagctggagagccgcaagaccgtcgagctggtgcagttcgtcggc
gcctgcgagatcgacccgatctatttcgacaagccctactacgtcgtgccccaggacgag
ctgtccgaggacgccttccgggtgctccgcgacgccctgaaggaatccgagaagatcggc
atcggccagatgaccctccgcggccgggaatacctggtcgcggtgaagaactgcggcaac
ggcctgctgctggagaccctgcattacgaggaggagatccggaagacggactccttcttc
gccgagctggactcttcctccgccgaggaggacctgctgaaggtggcgcgcgacctgatc
gcctcgaagagcgagaagttcgacgccggcgccttcaaggaccgctattcgacggaactc
cgcaagctcatcgaccgcaaggccaagggcaagacgccgatcgccaagggcggcaagtcc
agtggcgggagtaccggcggcgacaatgtcatcgacctgatgtcggccttgaagaagagc
ctggcggacagcggcggctcgcggaagcgcagcaccaaagcaccggccaaatcctcaggt
aaatcctccgcgaagaagtccaaatccggctccagcccgagccgcaaagcgtcctga

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