Thalassobaculum sp. OXR-137: T8K17_24610
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Entry
T8K17_24610 CDS
T09627
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
thar
Thalassobaculum sp. OXR-137
Pathway
thar03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
T8K17_24610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thar03400
]
T8K17_24610
DNA repair and recombination proteins [BR:
thar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
T8K17_24610
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Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
WPZ34402
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Position
5313595..5314491
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AA seq
298 aa
AA seq
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MPISARAIWKGQLRLSLVSIPVELYSATDRRARISLRQFHEPSGERIRYEKTVPGIGPVD
TDEIIKGYEVEDEFIPVTQEELDEIKLESRKTVELVQFVGACEIDPIYFDKPYYVVPQDE
LSEDAFRVLRDALKESEKIGIGQMTLRGREYLVAVKNCGNGLLLETLHYEEEIRKTDSFF
AELDSSSAEEDLLKVARDLIASKSEKFDAGAFKDRYSTELRKLIDRKAKGKTPIAKGGKS
SGGSTGGDNVIDLMSALKKSLADSGGSRKRSTKAPAKSSGKSSAKKSKSGSSPSRKAS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcccatctccgcccgtgccatctggaaaggtcagttgcggctgtcgctcgtctccatt
ccggtcgagctctattccgccaccgaccgccgcgcccgcatcagcctgcgccagttccat
gaaccgagcggcgaacggatccgctacgagaagaccgtccccggcatcggtccggtcgat
accgacgagatcatcaagggctacgaggtcgaggacgagttcatcccggtcacccaggaa
gagctggacgagatcaagctggagagccgcaagaccgtcgagctggtgcagttcgtcggc
gcctgcgagatcgacccgatctatttcgacaagccctactacgtcgtgccccaggacgag
ctgtccgaggacgccttccgggtgctccgcgacgccctgaaggaatccgagaagatcggc
atcggccagatgaccctccgcggccgggaatacctggtcgcggtgaagaactgcggcaac
ggcctgctgctggagaccctgcattacgaggaggagatccggaagacggactccttcttc
gccgagctggactcttcctccgccgaggaggacctgctgaaggtggcgcgcgacctgatc
gcctcgaagagcgagaagttcgacgccggcgccttcaaggaccgctattcgacggaactc
cgcaagctcatcgaccgcaaggccaagggcaagacgccgatcgccaagggcggcaagtcc
agtggcgggagtaccggcggcgacaatgtcatcgacctgatgtcggccttgaagaagagc
ctggcggacagcggcggctcgcggaagcgcagcaccaaagcaccggccaaatcctcaggt
aaatcctccgcgaagaagtccaaatccggctccagcccgagccgcaaagcgtcctga
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