Thalassobaculum sp. OXR-137: T8K17_25060
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Entry
T8K17_25060 CDS
T09627
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
thar
Thalassobaculum sp. OXR-137
Brite
KEGG Orthology (KO) [BR:
thar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thar03021
]
T8K17_25060 (rpoH)
Transcription machinery [BR:
thar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
T8K17_25060 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
LysM
HTH_11
UCR_14kD
HTH_25
Motif
Other DBs
NCBI-ProteinID:
WPZ34484
LinkDB
All DBs
Position
complement(5403510..5404409)
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AA seq
299 aa
AA seq
DB search
MASSGNTLPTISVEGNLSRYLQEIRKFPMLEPEEEYILAKNWREQGDTDAAHKLVTSHLR
LVAKIAMGYRGYGLPVAELISEGNVGMMQAVKRFDPERGFRLATYAMWWIRASIQEYILH
SWSLVKMGTTAAQKKLFFNLRKLKGQMQAIEDGDLSPDKVTAIAERLDVTEADVISMNRR
LASPDHSLNAPLRIDGEGEWQDWLVDDDQVSQETRLAEDEELQKRRLLLNSAMETLNDRE
RHILTERRLRDDPTTLEDLSQEYGISRERVRQIEVRAFEKLQKSIKNAAMEQKLLQERV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgagcggcaatacactgcccaccatcagcgtcgaaggcaatctgtcgcggtat
ctccaggagatccgcaagtttcccatgctcgagccggaggaggagtacatcctcgccaag
aactggcgcgagcagggcgacaccgacgcggcccacaagctggtcaccagccacctgcgt
cttgtggccaagatcgccatgggctatcgcggctacggcctgccggtcgccgagctgatc
tccgagggcaatgtcggcatgatgcaggcggtaaagcgcttcgatccggagcgcggcttc
cgtctggccacctatgccatgtggtggatccgcgcttccatccaggaatacatcctgcac
tcctggtcgctggtgaagatgggcaccaccgcggcccagaagaagctgttcttcaacctg
cgcaagctcaagggccagatgcaggccatcgaggacggcgacctctcccccgacaaggtc
accgccatcgccgagcgtctggacgtgaccgaggcggacgtcatctcgatgaaccgccgt
ctggcgagccccgaccattccctgaacgcgccgctgcgcatcgacggcgagggcgaatgg
caggattggctggtcgacgacgaccaggtcagccaggagacccgtctggccgaggacgag
gaactgcagaagcgccgcctgcttctcaattccgccatggagaccctgaacgaccgcgag
cggcatattctgaccgagcgtcggctgcgcgacgatccgaccaccctggaggatctgagc
caggaatacggcatcagccgcgagcgggtccgccagatcgaggtgcgggccttcgagaag
ctgcagaagtcgatcaagaacgcggcgatggaacagaagctcctgcaggagcgcgtctga
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