Pukyongiella litopenaei: C6Y53_01045
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Entry
C6Y53_01045 CDS
T05357
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
thas
Pukyongiella litopenaei
Brite
KEGG Orthology (KO) [BR:
thas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thas03021
]
C6Y53_01045 (rpoH)
Transcription machinery [BR:
thas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C6Y53_01045 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
HTH_19
HTH_11
Sigma70_r3
DUF3431
Motif
Other DBs
NCBI-ProteinID:
AVO36430
UniProt:
A0A2S0MKM9
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All DBs
Position
complement(209743..210639)
Genome browser
AA seq
298 aa
AA seq
DB search
MSSYANLPAPTPQGGLNRYMQEIRKFPLLEPEEEYMLAKRWVEEQDTEAAHKMVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILRS
WSLVKLGTTSAQKKLFFNLRKAKARIGALEEGDLRPENVKRIANDLGVSEDEVVNMNRRL
SGGDASLNATVGTDGDSTMQWQDWLEDEDADQAGDYEERDELEARRELLGLSLEVLNDRE
KEILTQRRLSETPVTLEELSGQFGVSRERIRQIEVRAFEKLQKKMRDLARERGMLNNR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctacgcaaatcttccggcccccacaccacagggtgggctgaaccgctacatg
caggaaatccgcaagtttccgcttctggaaccggaagaggaatacatgctggccaagcgc
tgggtcgaggaacaggataccgaggccgcgcacaagatggtcaccagccacctgcggctc
gccgctaagatcgcgatgggctatcgcggctacgggctgccgcaggccgaggtgatctcg
gaggcgaatgtgggcctgatgcaggcggtcaagcgtttcgatcccgaaaaggggttccgc
ctggcgacctatgccatgtggtggatccgcgcgtcgatccaggaatacatcctgcggtcg
tggtcgctggtgaaactggggacgaccagcgcacagaagaaactgtttttcaacctgcgc
aaggccaaggcccgtatcggggcgctcgaagagggcgacctgcggcccgaaaacgtcaag
cggatcgccaatgacctgggcgtgtccgaggacgaggtcgtcaacatgaaccgccgcctg
tcggggggcgacgcgtcgctgaacgcgacggtcgggaccgatggcgacagcaccatgcag
tggcaggactggctcgaagacgaggatgccgaccaggccggcgactacgaagagcgcgac
gagctcgaggcgcggcgggaattgctgggcctgtcgctcgaggttctgaacgaccgggaa
aaggaaatcctgacccagcggcggttgtcggaaacgccggtgacgctcgaggaactgtcg
ggacagttcggcgtcagccgcgaacggattcgccagatcgaggtgcgcgccttcgagaag
ctgcaaaagaagatgcgcgatctcgcccgcgaacgcggcatgttgaacaaccgctga
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