Pukyongiella litopenaei: C6Y53_01915
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Entry
C6Y53_01915 CDS
T05357
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
thas
Pukyongiella litopenaei
Brite
KEGG Orthology (KO) [BR:
thas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thas03016
]
C6Y53_01915 (rnd)
Enzymes [BR:
thas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C6Y53_01915 (rnd)
Transfer RNA biogenesis [BR:
thas03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C6Y53_01915 (rnd)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AVO36576
UniProt:
A0A2S0ML32
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All DBs
Position
complement(385383..386540)
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AA seq
385 aa
AA seq
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MKTLTTTRELRAFCDAARAHDYVTVDTEFLRERSYYSKLCLVQLAMPGEGNDNAVLVDPL
ADGISLDPLHELFRDETVVKVFHAARQDLEIFWVDAQVFPQPLFDTQVAAMVCGFGDQVG
YETLVRKIARQGLDKTSRFTDWSRRPLSKAQQTYALADVTHLRKIYEYLSAELDRTGRAH
WVAEELQVLTDPATYDIHPEDAWKRVKTRSNSPKFLAVVRELAGFREAYAQDRNVPRNRV
FKDDALIELASTKPQSPQDLGASRLLLREARKGAIAEGILDAVRRGIDCPSDRLPRPDRS
RDKLQVNPALADLLRVLLKAKTESTGVAPRLIASSADLDAIAAGQRDVDALSGWRHELFG
ADALRLCEGRLALAAKGETVQVVEL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccctgacgaccacacgggagctgcgcgcgttttgcgatgccgcgcgggcccat
gattacgttaccgtcgacaccgagtttcttcgcgaacgcagctattattcgaaactctgc
ctggtgcagctggccatgcccggcgaaggcaacgacaacgcggtgcttgtcgatccgctg
gcggatggcatctcgctggacccgttgcacgagctgttccgcgacgaaacggtggtcaag
gtgttccacgccgcgcggcaggatctcgagatcttctgggtcgatgcgcaggtgttcccg
cagccgctgttcgacacccaggtggcggcgatggtctgcggtttcggcgaccaggtgggg
tatgaaaccctcgtgcgcaagatcgcgcggcaggggctggacaagacatcccggttcacc
gactggtcgcgccgcccgctgagcaaggcgcagcagacctatgcgctggccgacgtgacc
catctgcgcaagatctacgaatatctcagcgccgagctggaccggaccggccgcgcccat
tgggtggccgaggaattgcaggtgctgaccgatccggcgacctatgacatccatcccgag
gatgcctggaaacgggtcaagacacgcagcaactcgccgaaattcctcgccgtcgtgcgc
gaactggccgggttccgcgaagcctatgcgcaggaccgcaacgtgccgcgcaaccgggtg
ttcaaggatgacgcgctgatcgaactggcatcgaccaagccgcaatcgccgcaggatctg
ggtgcgtcgcggctgttgctgcgcgaggcgcgcaagggcgcgatcgccgagggcatcctg
gacgcggtccgccgcgggatcgactgcccgtccgaccggttgcccaggcccgaccggtca
cgggacaagctgcaggtcaacccggcgctggccgacctgctgcgggtgctgctgaaggcc
aagaccgaatccaccggcgtggccccgcggctgattgcatcatcggccgatctggacgcg
atcgccgccggtcagcgggatgtggatgcgctcagcggctggcggcacgaactgttcggc
gctgatgcgctgcggctgtgcgagggccggctggcgctggccgccaagggcgaaaccgtg
caggtggtcgaactgtga
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