Pukyongiella litopenaei: C6Y53_02805
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Entry
C6Y53_02805 CDS
T05357
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thas
Pukyongiella litopenaei
Pathway
thas03420
Nucleotide excision repair
thas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C6Y53_02805
03430 Mismatch repair
C6Y53_02805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thas03400
]
C6Y53_02805
Enzymes [BR:
thas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C6Y53_02805
DNA repair and recombination proteins [BR:
thas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C6Y53_02805
MMR (mismatch excision repair)
Other MMR factors
C6Y53_02805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AVO39624
UniProt:
A0A2S0MUP9
LinkDB
All DBs
Position
complement(559082..561493)
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AA seq
803 aa
AA seq
DB search
MSSFDDSDAFEQASLSARAMAARGVDYLDDLNPAQRAAVEQLDGPVLMLAGAGTGKTKAL
TVRIVHLLKTGTARPDEILAVTFTNKAAREMKDRVGGMLGQPAEGMPWLGTFHAICVKLL
RRHAELIGFDRDDVVIESADDRVHLKSNFTILDTDDQLRLLKQLVQAAGIDDKRWPARML
AGIIDDWKNRALTPDKVPAGDAGAFNHKGVELYAQYQRRLVELNAVDFGDLLLHMVCIFQ
ASPDILEQYRRWFRYILVDEYQDTNVAQYLWLRLLAGGHRNICCVGDDDQSIYGWRGAEV
GNILRFEKDFPGAKVVRLEQNYRSTPHILAAASNVIRGNENRLGKELWTEAQDGEKVRLI
GHWDGEEEARWIGEEIEAMQGGTRRARPFGLDEMAVLVRASHQMRAFEDRFLTIGLPYRV
IGGPRFYERMEIRDAMAYFRVVVSPEDDLAFERIVNTPKRGLGDKARQTIQATARAQGVP
LLRGAAIAVENGLIKGKGGAALRDLVTGLARWGRMVGDAGVTHIELAEIILDESGYTAMW
QNDKTPEAPGRLENLKELVKALEGFENLQGFLEHVSLIMENDAGDAGAKVSIMTLHAAKG
LEFPAVFLPGWEDGLFPSQRSMDETGLKGLEEERRLAYVGITRAEEVCTISFAGNRRVYG
QWQSAMPSRFIDELPEDHVEVLTPPGLYGSTGGSMGGSTPAPTVDSRAARADVYNSPGWK
RMQARAARPGQSTGLSQPRESRTVVIDAEAVSSFARGERVFHQKFGYGEITGIEGDKVEV
AFEKAGTKKVVARFLSASDDIPF
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtttcgacgattctgatgctttcgagcaggcttcgctgtcggcccgcgccatg
gccgcgcgcggggtggattatctggacgatctgaacccggcgcaacgggcggcggtcgag
cagctggacggcccggtgctgatgctggcgggggcgggcaccggcaagaccaaggcgctg
accgtgcgcatcgtgcacctgctgaagaccggcaccgcgcgtcccgacgagatcctcgcc
gtcacctttaccaacaaggccgcccgcgagatgaaggaccgggtgggcgggatgctgggc
cagcccgccgaggggatgccctggctcggcacctttcacgcgatctgcgtcaagctgctg
cgccgccatgccgagctgatcggtttcgaccgcgacgacgtggtgatcgagagcgccgat
gaccgggttcacctgaaatcgaacttcaccattctggacaccgacgaccagttgcgactg
ctgaagcagctggtgcaggcggcggggatcgacgacaagcgctggcccgcgcggatgctg
gccgggatcatcgacgactggaagaaccgcgccctgacgccggacaaggtgccggcgggc
gacgcgggggcgttcaaccacaagggcgtggagctctacgcgcaataccagcgccgcctg
gtcgagctgaacgcggtggatttcggcgacctgctgctgcacatggtctgcatcttccag
gccagtcccgacattctggagcaataccggcgctggttccgctacatcctcgtcgatgaa
taccaggataccaacgtggcccagtatctgtggctgcggctgctggcgggcgggcatcgc
aacatctgctgcgtcggcgacgacgaccagtcgatctatggctggcgcggggccgaggtg
ggcaacatcctgcgtttcgaaaaggatttccccggcgccaaggtggtgcggctggagcag
aattaccgctcgaccccgcatatcctcgccgccgcgtcgaacgtcattcgcggcaacgaa
aaccggctcggcaaggaattgtggaccgaggcgcaggacggcgagaaggtccgcctgatc
gggcattgggacggcgaggaggaagcccgctggatcggcgaggaaatcgaggcgatgcag
ggcggcacgcgccgggcgcggcccttcgggctggatgaaatggccgttctcgtgcgcgcc
agccaccagatgcgggccttcgaggaccggttcctgaccatcgggctgccctatcgcgtg
atcggcgggccgcgattctacgagcgcatggagatccgcgacgcgatggcctatttccgg
gtggtggtgtcgcccgaggacgacctggcctttgaacgcatcgtcaacacgccgaaacgc
gggctgggcgacaaggcgcggcagaccatccaggccacggcgcgggcgcagggcgtgccg
ctgctgcgcggcgcggcgatcgcagtcgaaaacgggctgatcaagggcaagggcggcgcg
gcgctgcgcgatctggtcacggggctggcgcgctggggccggatggtgggtgatgcgggc
gtcacccatatcgagctggccgagatcatcctcgacgaatccggctataccgcgatgtgg
cagaacgacaagacgcccgaggcgccggggcggctggaaaacctcaaggaactggtcaag
gcgctggaggggttcgagaacctgcaggggttcctcgagcatgtcagcctgatcatggaa
aacgatgcgggcgatgccggtgccaaggtcagcatcatgaccctgcacgcggccaagggg
ctggagtttcccgccgtgttcctgccgggctgggaggacgggctgttcccgtcccagcgc
agcatggatgaaaccgggctgaaggggctcgaggaggaacggcggctggcctatgtgggc
atcacccgcgccgaggaggtctgcacgatctcgtttgccggcaaccgccgcgtctatggc
cagtggcaatcggcgatgccgtcgcggttcatcgacgaattgcccgaagaccatgtcgag
gtgctgacgccgccggggctttatggaagcactggagggagcatgggcggcagcacgccg
gcaccgacggtcgacagccgcgcggcgcgggcggatgtctacaattcgccgggatggaag
cggatgcaggcgcgggcggcccggcctggccagtcaacgggactttcgcagccccgcgaa
agccgaaccgtcgtcatcgatgccgaggcggtgtcgagctttgcccgcggggagcgcgtg
ttccaccagaaattcggctatggcgaaatcaccgggatcgagggcgacaaggtcgaggtc
gcgttcgagaaggcgggcaccaagaaggttgtcgcccggttcctgtcggccagcgacgat
atcccgttctga
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integrated database retrieval system
