Pukyongiella litopenaei: C6Y53_05280
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Entry
C6Y53_05280 CDS
T05357
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
thas
Pukyongiella litopenaei
Pathway
thas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C6Y53_05280 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thas03019
]
C6Y53_05280 (pnp)
03016 Transfer RNA biogenesis [BR:
thas03016
]
C6Y53_05280 (pnp)
Enzymes [BR:
thas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C6Y53_05280 (pnp)
Messenger RNA biogenesis [BR:
thas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C6Y53_05280 (pnp)
Transfer RNA biogenesis [BR:
thas03016
]
Prokaryotic type
tRNA degradation factors
C6Y53_05280 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AVO37174
UniProt:
A0A2S0MMR5
LinkDB
All DBs
Position
complement(1065458..1067596)
Genome browser
AA seq
712 aa
AA seq
DB search
MFDITTKTMQWGEETLTLETGKVARQADGSVIATLGETRVMANVTYAREQKPGQDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDIVAMIAASAALTISGVPFMGPIAGCRVGFADGEYVLNPTVDDMHDLRLNPEQR
LDLVVAGTKDAVMMVESEAYELSEAEMLGAVTFAHEQIQPVIDLIISLAESAAKEPFDFQ
APDYSDLFAAVQAAGEEQMRAAFAITDKQDRTAAVAAARETIKAALTEEQLGDANLGSAL
KKLEAGILRGDVVKGGKRIDGRSTTDVRPISCETGLLPRTHGSALFTRGETQGLVVTTLG
TGDDEQFIDALHGTFKSNFLLHYNFPPYSVGEVGRVGPPGRREIGHGKLAWRALQAVLPA
PTDFPYTVRLVSEITESNGSSSMASVCGGSLSMMDAGVPLKSAVAGVAMGLILEEDGSYA
VLTDILGDEDHLGDMDFKVAGTENGITSLQMDIKVAGITPEIMEKALAQAKDGRMHILGE
MNKALSGAGEFSVHAPRIETMNIPTDKIREVIGSGGKVIREIVEVSGAKVDINDDGVIKI
ASPNGEAIQKAYDMIHAIVAEPEEGAIYTGKVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKVVDQETGEEVAREKKESAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacataacgacgaagaccatgcagtggggcgaggagacgctcacgctggaaacc
ggcaaggttgcccgacaggcggacgggtccgtgatcgccacgctgggcgaaacccgtgtg
atggccaacgtgacctatgcccgcgagcagaagcccgggcaggatttctttccgctgacc
gtccactaccaggaaaaatactatgccgccggcaaggtgccgggcggtttcttcaagcgc
gaggcgcgcccgaccgaaaaggaaacgctgaccgcgcgcctgatcgaccgaccgatccgc
ccgctgttcgtgccgggcttcaagaacgaagtgctggtgatgtgcaccgtactgagccac
gacctggtcaatgacccggatatcgtggcgatgatcgccgcgtccgccgcgctgaccatc
tcgggcgtgccgttcatggggccgatcgccggctgccgcgtcgggtttgccgatggcgaa
tatgtgctgaacccgaccgtggacgacatgcacgacctgcgcctgaaccccgaacagcgg
ctggacctggtcgtcgccgggaccaaggacgcggtgatgatggtcgaatccgaagcctat
gagctgtcggaagccgagatgctgggcgcggtgacctttgcccacgaacagatccagccg
gtgatcgacctgatcatttcgctggccgaatccgccgcgaaagagccgttcgatttccag
gcgccggattattccgacctgttcgccgcggtgcaggccgccggcgaagagcagatgcgc
gccgcgttcgcgatcaccgacaaacaggaccgcaccgccgccgtcgccgccgcgcgcgag
acgatcaaggccgcgctgaccgaagaacagctgggcgacgccaatctgggctcggcgctc
aagaaactcgaagccggcatcctgcgcggcgacgtggtcaagggcggcaagcggatcgac
ggacgctcgaccaccgatgtgcgcccgatcagctgtgaaaccggcctgctgccgcgcacc
cacggttcggcgctgttcacccgcggcgaaacccagggcctggtggtgacgacgctgggc
accggcgatgacgaacagttcatcgacgcgctgcacggcaccttcaagtcgaacttcctg
ctgcattacaacttcccgccctattcggttggcgaggttggccgcgtcggacctccgggc
cgccgcgaaatcggccacggcaagctggcctggcgcgcgctgcaggcggtgctgccggcc
ccgaccgatttcccctacacggtccggctggtctccgagatcaccgaatcgaacgggtcg
tcgtcgatggcctcggtctgtggcgggtcgctgtcgatgatggatgcgggcgtgccgctg
aaatccgcggttgccggcgtggcgatgggtctgatcctcgaagaggacgggtcctacgcg
gtgctgaccgacatcctgggcgacgaggaccacctcggcgatatggacttcaaggtggcg
ggcaccgaaaacggcatcacctcgctgcagatggacatcaaggtcgcgggcatcacgccg
gaaatcatggaaaaggcgctggcacaggcgaaagacggccggatgcacatcctgggcgag
atgaacaaggcgctgtccggcgccggcgaattctcggttcacgcaccgcgtatcgaaacc
atgaacatccccaccgacaagatccgcgaagtgatcggctcgggcggcaaggtgatccgc
gagatcgtcgaggtgtccggcgccaaggtcgacatcaacgatgacggcgtcatcaagatc
gcatcgcccaacggcgaagccatccagaaggcctatgacatgatccacgcgatcgtggcc
gagcccgaggaaggcgcgatctataccggcaaggtcgtcaagatcgtcgatttcggcgcc
ttcgtgaacttctttggcaaacgtgacggcctggtgcatgtgtcccagatcgaaaaccgc
cgactgaaccatccgtccgacgtgctgaaggaaggtcaggaagtgaaggtcaagctgctg
ggctttgacgatcgcggcaaggtgcgcctgtcgatgaaggtcgtcgaccaggaaaccggc
gaggaagtcgcccgcgagaagaaggaaagcgccgagtaa
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