Pukyongiella litopenaei: C6Y53_07880
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Entry
C6Y53_07880 CDS
T05357
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
thas
Pukyongiella litopenaei
Pathway
thas00550
Peptidoglycan biosynthesis
thas01100
Metabolic pathways
thas01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
thas00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C6Y53_07880 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C6Y53_07880 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thas01011
]
C6Y53_07880 (mrdA)
Enzymes [BR:
thas01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C6Y53_07880 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
thas01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
C6Y53_07880 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AVO37629
UniProt:
A0A2S0MP11
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All DBs
Position
1571791..1573734
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AA seq
647 aa
AA seq
DB search
MKRNPQELEQVHRRMSRRTLLVGGLMGGFAGALAWRMHRLQVDEADQFRLLAEENRINIR
LIAPARGKLFDREGRVIARNTPSYRIIIVPEDAGDVDAVISRLSQLVELDQEDLNRAMTE
MKRSPPFLPVTLADQVSWEAVSRVAVNAPALPGVTPEVGLTREYPRNADFAHVVGYVGPV
SDYDLSKIEDPEPVLRIPRFQIGKVGLEAKREDVLRGKAGAKRVEVNATGRVMRELDRRE
GQPGADLQLTVDAQLQTYVQARLAGESAAAVVIDCADGDLRAIASAPSFDPNLFVRGISV
GDYRALTEDKYRPLANKTVQGTYPPGSTFKMITAMAALEEGLVGPEETVWCPGHMEVSGR
RFHCWRRGGHGHVNLLNSLKQSCDVYYYDLALRVGIDKISAMAHRFGLGERHDIPMSAVA
RGLAPDRAWKNQVHDQDWRVGDTVNASIGQGYMLASPLQLAIMSARIATGRAVAPRLVKS
VDGIEQPSGGGGDLGVNRANLDRIRRAMYAVSNDRRGTAYRNRIIAEEQRMAGKTGTSQV
RNITKEERARGVIRNSDLPWERRDHALFVCYAPYENPRFAVSVVVEHGGGGSTAAAPIAR
DVLLQALYGGPPPLTAYPKGDRGRIKAQQEQMEQDFPALRAEASDRA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaatccccaggaactggaacaggtccaccgccgcatgagccgccgcaccctg
ctggtcggcgggttgatgggcgggtttgccggtgcgctggcctggcggatgcaccggctt
caggtcgacgaggccgaccagttccgcctgctggccgaggaaaaccgcatcaacatccgg
ctgatcgccccggcgcgcggcaagctgttcgaccgcgagggccgggtgatcgcccgcaac
acgcccagctaccgcatcatcatcgtgcccgaggatgccggcgacgtggacgcggtcatt
tcgcggctgtcgcagctggtggaactggaccaggaagacctgaaccgcgcgatgaccgag
atgaaacggtcgccgcccttcctgccggtgacgctggccgaccaggtcagctgggaggcg
gtgagccgcgttgccgtgaacgccccggccctgcccggtgtgacgcccgaggtcggcctg
acgcgggaatacccccgcaacgcggatttcgcccatgttgtcggctatgtcggcccggtc
agcgactacgacctgagcaagatcgaagatcccgaaccggtgctgcgcatcccccggttc
cagatcggcaaggtcgggctcgaggccaagcgcgaagacgtgctgcgcggcaaggccggt
gccaagcgggtcgaggtcaatgccaccggccgggtgatgcgcgagctcgaccggcgcgaa
ggccagccgggcgccgacctgcaactgaccgtggacgcgcaactgcagacctatgtgcag
gcgcggctggcgggtgaaagcgcggcggcggtggtgatcgactgcgccgatggcgacctg
cgggcgatcgcctcggcccccagcttcgatcccaacctgttcgtgcgcggcatctcggtg
ggcgattaccgggcgctgaccgaggacaagtatcgtccgctcgccaacaagacggtgcag
ggcacctatccgcccggttcgaccttcaagatgatcaccgcgatggcggcgctcgaggaa
ggcctggtcggccccgaggaaaccgtctggtgccccggccacatggaggtatccgggcgt
cggttccattgctggcggcgcggcggccacggccatgtgaaccttctgaattcgctgaaa
cagagctgcgatgtctattactacgacctggcgctgcgggtcggcatcgacaagatctcg
gcgatggcgcaccggttcggactgggtgaacggcacgacatcccgatgtctgcggtggcg
cgcgggctggccccggaccgggcgtggaagaatcaggtccacgaccaggactggcgcgtg
ggcgacacggtcaacgcctcgatcggacagggctacatgctggcctcgccgctgcagctg
gccataatgtcggcccggatcgccaccggccgcgcggtcgcgccccggctggtcaaatcg
gtggacgggatcgagcagccctcgggcggcggcggcgatctgggcgtgaacagggccaac
ctggaccgcatccgccgcgccatgtacgcggtcagcaacgaccggcgcggcacggcctat
cgcaaccgcatcatcgccgaagaacagcgcatggccggcaagaccggcaccagccaggtg
cgcaacatcacgaaggaagaacgcgcacgcggggtcatccgcaacagcgacctgccctgg
gaacggcgcgaccacgcgctgttcgtatgctacgcgccctatgaaaacccgcgtttcgcg
gtctcggtggtggtcgaacatggcggtggcggatcgaccgcggcggcgccgatcgcacgc
gacgtgttgttgcaggcgctttatggcggaccgccgccgctgaccgcctatcccaagggc
gaccgcggccggatcaaggcccagcaggaacagatggaacaggatttccccgcgctgcgg
gcagaggcgagcgaccgggcatga
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