Pukyongiella litopenaei: C6Y53_12045
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Entry
C6Y53_12045 CDS
T05357
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
thas
Pukyongiella litopenaei
Brite
KEGG Orthology (KO) [BR:
thas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thas02000
]
C6Y53_12045
Transporters [BR:
thas02000
]
Other transporters
Pores ion channels [TC:
1
]
C6Y53_12045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON
DUF748
Motif
Other DBs
NCBI-ProteinID:
AVO38348
UniProt:
A0A2S0MR34
LinkDB
All DBs
Position
complement(2441660..2443702)
Genome browser
AA seq
680 aa
AA seq
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MRRNPTLFALLAFLFAAALCLAGAAVAVSVVEDKTEINIRETLDLNGHDWAEVEADGLRV
ILTGTAPDEASRFLALSSAGENVDAARIIDEMDVVPGTEVAPPRFSAEILRNADGISIIG
LIPTRTDRNRLNRRLAEIAGAGTVADFLESADYAVPPGWDAAMDFALTVLDRMPRSKISV
SADTLMVSGMTDSAEAKAELEDELSRTAPPQLRLTLDISSPRPVITPFTLRFLIDERGPR
FDACSADTKLTRGRIIKAATAVGMTGDPDCTIGLGVPSPNWGTAAELTIAALAKLGGGHL
TMADAEISLTAAQGTDPDQFDLVVGELQTALPPVFALDAVLPEPEVTGAGDGPPEFTATL
SPEGLVQLRGRVEDETQRLMADSFARAQFGSDRVHMAVRVVPGQPEDWAVRVLVGLEALA
ELLNGSATVTPDSVTLRGASYDPDADARLSRLLAAKLGDVGGFSLEIATRDRPIPQDAPP
DPELCEAQIIETQQNQKIAFEPGSATITEDSLGTMNRIADILSDCGEIRLEIQGHTDSQG
REIMNKELSQSRAQSVLNELRARRVLTSSYAAVGYGESRPIADNGTEEGREANRRIEFHL
IRPEPIKEERTTLEEVAAEAASGQAADAAPESDPETTSETAEGTGEDGGETATGGDADTA
AGDSEEGDGDGTENATNEQN
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcaatccgaccctgttcgccctcctcgcctttttgttcgccgccgcgctgtgc
cttgccggcgcggccgtcgcggtgtccgtcgtcgaggacaagaccgagatcaacatacgc
gagacgctggacctcaacggccatgactgggccgaggtcgaagccgacgggctgcgcgtc
atcctgaccggaaccgctcccgacgaagcgtcgcggttcctcgcgctcagcagcgccggc
gaaaacgtggatgccgcacggatcatcgacgagatggatgtcgtgcccggcaccgaggtg
gcgccgccgcgtttctcggccgagatcctgcgcaacgcggacggcatctcgatcatcggc
ctgatcccgacccggaccgaccgcaaccggctgaaccgtcggctggccgagattgcgggc
gccggaacggtggccgattttctcgaatccgccgattacgcggtgccgcccggctgggac
gcggcgatggatttcgcgctgaccgtcctggaccggatgccgcgctcgaaaatctcggtc
tccgccgatacgctgatggtgtcgggcatgaccgacagcgccgaggccaaggcggaactg
gaggacgagctgtcgcgcaccgccccgccgcagctcaggctgacgctcgacatctcgtcg
ccgcgcccggtgatcacgccgttcacgctgcggttcctgatcgacgagcgcggcccgcgc
ttcgatgcctgttcggccgataccaagctgacgcgcgggcgcatcatcaaggccgccacc
gccgtcggcatgacaggcgatcccgactgcaccatcgggctgggcgtcccgtcgccgaac
tggggcaccgccgccgaactgacgatcgccgcgctggcaaagctgggcggcgggcacctg
acgatggcggatgccgagatatcgctgaccgccgcgcagggcacggacccggaccagttc
gacctcgtggtgggcgagttgcagacggcgctgccgccggttttcgcgctggatgccgtc
ctgcccgagccggaagtcaccggcgcgggcgacggcccgcccgagttcacggccacgctc
agccccgaaggtctggtgcagctgcgcgggcgtgtcgaggatgaaacccagcggctgatg
gccgacagctttgcccgggcgcagttcgggtcggaccgtgtgcatatggccgtgcgcgtg
gtgcccggccagcccgaggactgggcggtgcgggtgctggtcgggctcgaggccctggcc
gagctcctgaacggttcggccaccgtgaccccggacagcgtgacgctgcgcggcgccagc
tacgatcccgacgccgatgccaggctgtcgcggctgctggcggccaagctgggcgatgtc
ggcggcttctcgctcgagatcgcgacccgcgatcgcccgatcccgcaggacgcgccgccc
gatcccgaactgtgcgaggcacagatcatcgagacccagcagaaccagaagatcgcgttc
gagcccgggtccgccaccatcaccgaggattcgctcggcaccatgaaccggatcgccgac
atcctgtcggattgcggcgagatccggctggaaatccagggccataccgacagccagggc
cgcgagatcatgaacaaggaactcagccagtcccgcgcccagtcggtgctgaacgaactg
cgcgcgcgccgggtgctgacctcgtcctatgccgcggtgggctatggcgaaagccgcccc
atcgccgataacgggaccgaagagggccgcgaggcgaaccgccggatcgagttccacctg
atacgccccgagccgatcaaggaagaacggaccacgctggaggaagtcgccgccgaagcc
gcatccggacaggccgccgatgcggcccccgaatcggacccggaaacgacatcggaaacg
gcagagggcaccggtgaagacggtggtgaaacggcgacaggcggggatgcggatactgcc
gcgggcgacagcgaagaaggcgacggggacggaacggagaacgcgaccaatgagcagaac
tga
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