Pukyongiella litopenaei: C6Y53_15375
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Entry
C6Y53_15375 CDS
T05357
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
thas
Pukyongiella litopenaei
Pathway
thas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C6Y53_15375 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thas03019
]
C6Y53_15375 (recQ)
03400 DNA repair and recombination proteins [BR:
thas03400
]
C6Y53_15375 (recQ)
Enzymes [BR:
thas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C6Y53_15375 (recQ)
Messenger RNA biogenesis [BR:
thas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C6Y53_15375 (recQ)
DNA repair and recombination proteins [BR:
thas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C6Y53_15375 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
AVO38950
UniProt:
A0A2S0MST7
LinkDB
All DBs
Position
3135003..3137045
Genome browser
AA seq
680 aa
AA seq
DB search
MQRADDILREIFGFDCFRPGQEEIVHAVAAGENVLAIMPTGGGKSLCFQLPALLRDGVTV
VISPLIALMRDQVRALQEAGVAAGALTSGNTGEENDAVFAALNEGRLKLLYMAPERLASG
AAAAMLRRAGVSLIAVDEAHCVSQWGHDFRPDYLRIGELRRALRVPLAAFTATADAETRT
EIVEKLFDGGTPRVFLRGFDRPNIHLAFAAKDGPRQQILRFADARRGQSGIVYCGTRAKT
ETLADALEVDGHNACAYHGGMEPADRRAVEDRFAREDGLIVVATVAFGMGVDKPDIRWVA
HADLPKSIEAYYQEIGRAGRDGAPAETLTLFGADDIRLRRTQIDESPAAPERRAADHARL
NALLGLAEALGCRRRMLLRYFGETAEPCGYCDLCDTPPETFDGTQAVRKALSAILRTGEW
FGTGHLTDILTGNATEKVRARGHDALPTFGVGGEFDRRGWQAVFRQMMGHDLVRPDPERH
GALRLTDAALPILRDAATIDLRRDTIRAAGRRPDTPRALVSDEDAPLLAALKARRRDLAE
TARMPAYMVFTDRTLIEMAETRPADLDAMARISGVGAKKLDRYGAEFLAVINGAADIPHP
ARRKLAGQGAGDLYDRLLAVQTDLARGACGTLKPMSCPAPLLARVAQLRPGDAGTLERLL
GDRRAERFGPAFLDVLQGAG
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgccgacgacatcttgcgcgagatattcggtttcgactgcttccggcccggg
caggaagagatcgtccatgcggtggccgcaggcgaaaacgtgctggcgatcatgcccacg
ggcggtggcaaatccctgtgtttccagctgcccgcgctgctgcgcgacggcgtcacggtg
gtcatctcgccgctgatcgcgctgatgcgggaccaggtgcgcgcgctgcaggaggccggt
gtggccgccggcgcgctgacctcgggcaataccggcgaagaaaacgacgccgtgttcgcc
gcgctgaacgaaggccggctgaaactgctctacatggcgcccgaacggctggcctcgggc
gcggcggcggcgatgctgcggcgggcgggcgtgtcgctgatcgcggtggacgaagcccat
tgcgtcagccagtggggccatgatttccgccccgattatctgaggatcggcgaattgcgg
cgggcgctgcgggtgccgctggcggcattcaccgcgaccgccgatgccgaaacccgcacc
gagatcgtggaaaagctgtttgacgggggaacgccgcgcgtgttcctgcgcgggttcgac
cggcccaacatccacctggcctttgccgccaaggatgggccgcgccagcagatcctgcgc
tttgccgatgcgcggcgcgggcagtcggggatcgtctattgcggcacccgcgccaagacc
gaaacgctggcggacgcgctggaggtcgacggccacaacgcctgcgcctatcacggcggc
atggagccggccgaccgccgcgcggtcgaggatcgctttgcccgcgaagacggtctgatc
gtggtcgccaccgtcgccttcggcatgggcgtggacaagccagacatccgctgggtggcc
catgcggacctgcccaagtcgatcgaggcctattaccaggaaatcggccgcgccgggcgc
gatggcgccccggcggaaacgctgaccctgtttggcgccgatgacatccgcctgcgccgc
acccagatcgacgaaagccccgccgcgcccgaacgccgcgccgccgatcacgcccgtctg
aacgcgctgctgggcctggccgaggcgctgggctgccgccgccggatgctgctgcgctat
ttcggtgaaaccgccgaaccctgcgggtattgcgatctctgcgacaccccgcccgaaacc
ttcgacggtacccaggccgtgcgcaaggcgctgtcggcgatcctgcgcaccggcgaatgg
ttcggcaccgggcacctgaccgacatcctgaccggaaacgcgaccgaaaaggtccgcgcg
cgcggccatgacgcgctgcccaccttcggcgtcggcggcgagttcgaccgccgtggctgg
caggcggtgttccggcagatgatgggccatgacctcgtgcgccccgatcccgaacgtcac
ggcgcgttgcggctgaccgacgccgcgctgcccatcctgcgcgatgcggcgacgatcgac
ctgcgccgcgacacgatccgggctgccgggcgccggcccgatacgccgcgcgcgctggtg
tcggacgaggacgccccgctgctggccgcactcaaggccaggcgccgggacctggccgaa
accgcccggatgcccgcctacatggtgttcaccgaccgcaccctgatagagatggcggaa
acccggcccgccgatctggacgcgatggcacggatcagcggcgtcggggccaagaagctc
gaccgctacggcgccgagtttctcgcggtcatcaatggcgcggcggatatcccgcacccg
gcgcggcgcaagctggccgggcagggggcgggcgacctctatgaccggctgctggcggtg
cagaccgatctggcgcgcggggcctgcgggacgctgaaaccgatgagctgtccggcacca
ttgctggcgcgggtcgcacagctgcgccccggcgatgccgggacgctggaacggctgctg
ggcgaccggcgcgcggaacggttcggccccgcctttctggatgtgttgcaaggggccggg
tag
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