Thalassomonas haliotis: H3N35_04840
Help
Entry
H3N35_04840 CDS
T08805
Name
(GenBank) diguanylate cyclase
Organism
that
Thalassomonas haliotis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GGDEF
AAA_16
Pkinase
PK_Tyr_Ser-Thr
GAF
DUF8739
nSTAND6
NB-ARC
TPR_CHK1
AAA_22
GAF_2
GAF_3
nSTAND_NTPase5
KAP_NTPase
NACHT
Sigma54_activat
APH
Kdo
BrxC_BrxD
GGDEF_GdpP
HEAT_Nup120
nSTAND1
Rad17
ATPase_2
AAA
TsaE
RsgA_GTPase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
WDE12801
UniProt:
A0ABY7VH81
LinkDB
All DBs
Position
complement(1151845..1157457)
Genome browser
AA seq
1870 aa
AA seq
DB search
MKAEINGYQLQQQIYESTSCLIFRAIRKKDQQSVILKLLNQDFPSSQALTRYKQEYKALS
RLSSPRVPATYDLITSQEKPVLVLEDFQGSSLQSLLTKQHFSTPDKLYYCIEICKALADI
HEQNIIHKALCPAHVLINPTTRQVKIIDFSIAAEFNREAPALKAREQLTGNLAYLSPEQS
GRMNRLLDYRSDYYALGGIIYLLFTGRLPFEDSDPLELIYSHMAKQPPSPSLINEDVPEI
ISDICMKLLAKNSEQRYCSTRGIIHDLKLCLEQANKNQPLKRFSLAAEDHPCQLQISQKI
YGRSRQVEQIRQKLQDISQGQVAIMLVSGESGIGKTTLIQEVYQPLTGFKGYFIRGKFNR
YAKSIPYSAFIYAFKQLLTIILSSSKEQLAGWKTRINNTLDSNIQVLTDLLPELKLITGE
PPALPELGPRENENRFRQVLKKFIHLFCQPQHPLVIFIDDLQWLDMASGQLIQSLLLDKS
LGYFYLLGAYRKSEPGENHALATLLNQLKAKNVPVTNISLAPLSQGDIRHFLADSLVSKT
KNVTELAELIREKTLGNPFFIKEFISELYRKNFISFDSGQKSWHWDLKKITSANITDNVI
NFMVAKLKALPKHTLELLKLASCAGSRFNLNTLAALSKTSPEQCYQELLPALEARLIQPL
SEPELSSQVLISARLLIFKLKFLHDKVQQAAYSLLTPQQKQLIHYNLGCLLFERGNPSNE
QLFEEVAHLNLGAALITNPFGIIEVIKLNIKAAAIARASSAYQASAELSRQARKLLPENS
WSSHFDLTFTVYLALIQAEYLSGHFDRADNLYPVVLNHIKERKDLLELYTTKMMQANLSG
DFSQAVTSGQRGLGLLAIEFPENENLAEKLFLHEHHGIKKLTALFEEKTKQAALNAKTGS
KGPESSDEIKYAMKLLSYLWMPVYFLGRINTLGWLSAKMTALSLKQGNNEYSAYGYMNYA
FTLYSAREDYQQANKFSRLALDLIQTYDNNEIKGKVLMLSAASGHWHRPLEAQEEIFQSA
FEYSLDCGDFTTAGYSAIWLLITGFFSGKHFDQLSREAANFYQFHLEHESGHLQELFLPF
SSQLLTSLSGVSSFDLKIGIAFNQDIFLTKHQHNPVALGFYYSARLYRALVLEQMQTPEQ
AISQCEQGNRFNPGTILIPFNNFHLCLILTGNFNQYTNEEHQKKAKSKINSLLRQMKNWS
ELNPGNYLHKYLLMSAESARISRENHSSVMQKYEAAISSLEQTRYKHYLALANKCYAAYL
QHKGHIKIAAMYLQQALYLYQGWGFAIPVRQIKEHYARLMPLPAQTPLPIPEDNKHLPLD
NHTLDKLHQALAGESSQEKLLQQLICLTAENAGADKAILILQEPDSEHWFIEAQYQLGAG
QADIRVLQHESPAQDKLPLSLIEYNLRLGKDLLLANPHQQSQFSRDNYIKTHKPGSILCC
ALFSRGKVSGLIYLENQISSYAFTREHLTSLKLISGFSAMLLENARLSRELDLRVKSQTQ
ALKFKAEFASLLAELSNQLTNLPADEYDREIARALAVLGNFCQLDNIYVYLSKGKILKIS
HSWHFKTSKLPLDINITRYKNFIRFIEEKNCFSFQSLAEIPAPAADFNQGLARYQFNSGV
ITCLSDKAENPGFIAFDGSTNQHSWTEPEIALLKTAAGIIACALENSQLAEKLKQTQEAL
VKTEHQLNQNVQLDELTGLHNRVYFHRQLTLEITRAARNQRYLSLILLDIDYFRRYNDNY
DHMAGDEALVKVARCIQKLLKRSGESIARFGGEEFAIILPETDLKHAHKTATLLCKSIRR
LALPHPCSDAANILTVSLGIATAKTGVQSSAEVMLSAANKALYQAKTNGRNRFAAIELES
SHYAEPRQGT
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcggaaattaacggatatcagttacaacaacaaatatatgaaagtacaagctgc
cttatctttcgcgctatcagaaaaaaagatcaacaaagcgttatccttaaactgcttaac
caagacttccccagcagccaagccctcacccgctataaacaggaatataaagccttaagc
cgcttatccagcccccgggtgcctgcgacttatgacttaatcaccagccaggaaaaaccc
gtgctggtattggaagacttccagggcagctcattacagtccctgctgacaaagcagcac
ttttcaacaccagacaagctctactattgcatcgagatctgtaaagcattagccgatatc
catgaacaaaatattattcataaagccctctgtccggcgcatgtcctgatcaatcccacc
acacggcaagtcaaaatcattgatttctcgatagcagctgaattcaaccgtgaagccccg
gcattaaaagccagagaacagttaaccggcaatctcgcttatctgtcgccggagcagtcg
ggacgtatgaaccgcttactggactatcgcagcgattattatgctttaggagggatcatc
tatttactgtttaccggacgcctcccttttgaggatagcgatcccctggagttaatctac
agccatatggccaagcagccaccgtcgcccagcttaataaatgaagacgtgcctgagata
atatcagatatctgcatgaaattactggcgaaaaattcagaacaaagatactgctccacc
agggggatcatacatgatctgaagttgtgccttgaacaggctaacaaaaatcagcccctt
aagcgtttctccctcgccgctgaagatcatccgtgccagctgcaaatctcccaaaaaata
tatggccggagccggcaagttgaacaaatacggcaaaaactgcaagacatcagccagggc
caggttgccataatgttagtctccggagagtcgggcataggaaaaaccaccctgatacag
gaagtctatcaacccctgaccggttttaaaggctatttcatccggggaaaattcaaccgc
tatgccaaaagcatcccctactccgcctttatttatgcctttaaacaattgcttaccatc
atactaagcagctcaaaagagcaattggcggggtggaaaaccaggataaacaataccctg
gacagcaatatccaggtattaacggatttattgccggaactaaagcttatcaccggcgag
ccgcctgccctgcccgaactgggcccccgggaaaatgaaaatcgcttcagacaggtatta
aaaaaatttatccatctgttttgccagccccagcacccgctggttatctttatcgacgat
ttacaatggctggatatggcgtccgggcagttaatccaatccctgctgctggataaaagc
ctgggttatttctacctactcggcgcctaccgaaaaagtgaacccggtgagaaccacgct
ttagctactctgctcaatcaacttaaagccaaaaacgttcccgtgaccaacatctccctt
gcccccttatcccagggcgatatcaggcactttttagccgacagcctggttagcaaaaca
aaaaacgtcactgaactggcagaattgatccgggaaaaaaccttaggcaacccttttttt
atcaaggaatttatctctgaactttaccggaaaaacttcatcagcttcgatagcggacaa
aaaagctggcattgggatctcaaaaaaatcacctccgccaatatcacagataatgtcatt
aattttatggtggctaagttaaaagcactgccaaagcataccctggagttattaaaactg
gcctcatgtgccggcagcaggtttaacctaaataccctggcagccctcagcaaaacttcg
ccggagcaatgctaccaggagttattgccggcacttgaggccaggctgatccagccctta
tccgaaccggaattatcaagccaggtactgatttctgcccggttattgatctttaaactg
aaatttcttcatgacaaggtgcagcaggcggcctactccctgctgacgcctcagcaaaaa
cagcttatacattataatctcggctgcttgctgttcgaacgcggcaaccccagtaatgaa
cagctctttgaagaagtggcccacctgaacctgggagctgcgctgatcaccaaccctttc
ggcatcatagaagtcataaaattaaatataaaagcggcagccatagctcgcgcttcaagc
gcttatcaggcatcggccgaattgagccgacaggccagaaaattattacctgaaaatagc
tggtcatcccatttcgatctgacttttaccgtctacctggcattaattcaagccgagtat
ttgtccgggcattttgaccgtgccgataatttatatcctgtggtacttaaccatatcaag
gaaagaaaagacctgctggagctttataccaccaagatgatgcaggcaaatctcagcggt
gactttagccaggccgtcacctcgggacaaagaggcttaggcctgcttgccattgaattt
cccgaaaatgaaaacctggcggaaaagctgtttttacatgaacaccatggcatcaaaaaa
ctcaccgccttgttcgaggaaaaaacaaagcaagcagccttgaatgccaaaacaggctct
aaaggccctgagtcatccgatgaaataaaatatgccatgaagctcctgagctatctctgg
atgccggtttattttctcggaaggataaacaccctgggctggctttccgccaaaatgacg
gctttaagcctgaaacagggcaacaatgaatactcggcttatggttatatgaactatgcc
tttacgctatattctgcccgggaagattaccaacaggccaacaagttttcccggctcgca
ctcgatcttatacagacgtatgataataatgaaattaaaggaaaagtattaatgctctca
gccgccagcggacactggcaccgcccgcttgaagcacaggaagaaattttccaaagtgct
tttgaatattctctggactgcggcgattttactaccgcaggttatagcgccatctggctg
ctgataaccggttttttcagcggcaaacatttcgaccagctttcccgggaggcggccaat
ttctatcaattccaccttgagcatgaatccgggcatttacaggaactgtttttacccttt
tccagccagctgctgacgagcttatccggggtttcatcttttgatttaaaaataggcatt
gcctttaaccaggatatctttcttaccaagcatcagcataacccggtcgctttgggtttt
tattatagcgcaaggctataccgggccttggtattagaacaaatgcaaacaccagaacaa
gctatttctcaatgtgagcaggggaaccgctttaatcccggcactatactgatccctttt
aacaacttccacctctgcctgattttaaccggaaatttcaatcagtatactaatgaagaa
catcagaaaaaggccaagagtaaaattaatagcctgctcaggcaaatgaaaaactggagt
gagctaaacccgggcaattatttacataaatacctgttgatgtcggccgaatctgcccgg
atttcaagggaaaaccacagtagtgtgatgcaaaaatatgaagccgccatttcatcattg
gagcaaacccggtacaaacattacctggcactggcaaataaatgttatgccgcctatttg
caacacaaaggacatattaaaattgccgccatgtacctgcagcaagccctctatctttat
cagggctggggctttgccattcccgtcagacaaattaaagagcattatgcccggctgatg
ccgctcccggcccaaacgccgttaccaatacccgaagacaacaaacatctgccgcttgat
aaccataccctggataaactccaccaggcccttgccggggaaagcagccaggaaaaactg
ttacaacaattaatctgcctgacggctgaaaatgccggcgccgacaaggccatcctgata
ttgcaggagccggacagcgaacactggtttatcgaagcacaatatcagcttggggccggg
caggcggatatccgggtattgcaacatgaatctccggctcaggataagctcccgctatcc
ctgatcgaatataaccttcgcctgggcaaagacctgctgcttgccaacccccaccaacaa
agccagtttagccgggataattatataaaaacacataaacccggctccattctctgctgt
gccttattcagccgtggaaaagtaagcggcctgatatacctggaaaaccaaatctccagc
tatgcctttacccgggagcacctgaccagcttaaagctgatctcaggtttttcagccatg
ctattggaaaatgcccgcctgagccgggagctcgatctccgggtaaaaagccaaacccag
gcattaaaattcaaagccgagttcgcgtccctgctggctgagttatcaaatcaactgaca
aacttgccggcggatgaatacgacagggaaatagcccgggcactcgccgttttaggaaac
ttttgccagcttgataatatctatgtctatctcagcaaaggcaagatactgaaaatcagc
cacagctggcatttcaaaaccagcaagctgccgcttgatatcaatatcaccaggtacaag
aactttatccgttttatcgaagaaaagaactgcttttcctttcagtcattagcagaaatc
cccgctccggcagcggattttaatcaaggcctggcccgataccaattcaactcaggggtc
atcacctgcttatcagataaagccgaaaatccaggttttatcgccttcgacggctcaacc
aaccagcactcctggactgagcccgaaatcgctttgcttaaaacagccgccggcattatt
gcctgcgccctggaaaacagccagctggccgaaaaactcaaacagacacaagaggcattg
gtcaaaacagagcatcagcttaaccagaatgtccagcttgatgaacttaccggactccat
aaccgggtatacttccaccggcaattaactttggaaataacacgcgctgcaagaaaccag
cgctacctgtcgttaattttactggatattgattatttcaggcgttataacgacaactat
gatcatatggccggggatgaagccctggttaaagttgcccgctgcatacaaaagttactg
aaacgctcgggagaaagtatcgcccgctttggcggagaagagtttgccattattcttcct
gagaccgacttaaagcatgcccataaaaccgcaaccttattatgcaagtcaatccgcaga
ttagcgctcccccacccctgctccgatgccgcgaacattttaaccgtaagcctgggcata
gcaacagcaaaaaccggggtacaaagctctgcagaagttatgctgagcgctgcaaataaa
gccctttaccaggcaaaaaccaatggccgcaatcgctttgccgccatagagctggaaagt
agccattatgccgaacccaggcaagggacttga
DBGET
integrated database retrieval system