KEGG   Thalassomonas haliotis: H3N35_13670
Entry
H3N35_13670       CDS       T08805                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
that  Thalassomonas haliotis
Brite
KEGG Orthology (KO) [BR:that00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:that02044]
    H3N35_13670 (tssF)
Secretion system [BR:that02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   H3N35_13670 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: WDE09386
UniProt: A0ABY7V6U3
LinkDB
Position
complement(3256621..3258450)
AA seq 609 aa
MTSLYEYFQEEMRFLRASVADFSLTYPEVAAELKLSAGRSADADVEQLLQSFAYMTGQLR
GDLQKQRDQIPNQLLHSLYPNLIRSLPCMTVLKANVENDGANFINGYSLEKGRQFIGKAR
RVVKGGQSESTDCQFINCYHTPMWPFDVSEIKVLPKNYFGFLDQRTDVQSVISVRIANTG
TEALHQYPLEKLRFYIGDISQRFQLYRLLADSLVGCAVRVNDKVVLLDDADNKADSAIHW
LGFDREENVLPDDAGSHRAYRLLQEYFTFPEKFYFFEVTRLLEKEALSGAIDSFEILFLL
NETSNGISLTKSSFEVNCFPAINLFARSFKPVQLKQNQHEYRLLADERFYLQSEVHSISE
VRSIAFDGKSNTVSAWLGTNTKPTANQYYITRLTQLLTPGERGCDTFLSIYDADFSPSQP
IDQTLVVKGWCNNRRLPEALRVGQKMQLVGAGPMLNADVVEMPTKFKGASLDGENNIKLL
SQLSLNLNALGEGENRLELLRQLLRLYCDPNAVSHARQLDGLTGMASKAVVKRIGKQMWR
GHCRGTRVSLSINEDYFDGANPLLLGAVLSYFFGLYTSLNHFVQLQLISDKREGVWKQWP
ARIGEQVIL
NT seq 1830 nt   +upstreamnt  +downstreamnt
gtgacgagtttatatgagtattttcaagaggaaatgcgctttttacgcgcttcggtagca
gattttagtctgacctacccggaagtggctgccgagctcaaattaagcgcaggccgctct
gccgacgccgatgtcgagcagttgctgcaatcctttgcttatatgaccgggcaattgcgc
ggcgatctgcaaaaacaaagggatcaaatccccaaccagttgctgcacagcctttatccc
aacctgatccgctccttaccctgcatgacggtattaaaggcaaatgtcgagaacgacggc
gccaactttatcaacggttacagcctggaaaaaggccggcagtttatcggcaaggccagg
cgcgtggtcaaaggcggccagagcgaaagcaccgactgccagtttatcaattgctaccat
acgccgatgtggccttttgatgtcagtgaaatcaaggtattgccgaaaaactactttggc
tttctcgaccagcgcaccgatgtccagtcggtgatctcggtgcggatcgccaataccggc
accgaggcgctgcaccaatatccgctggagaagctgcgcttttatatcggcgatatcagc
cagcgcttccagctgtaccgcttgctggccgacagcctggtgggttgtgcggtgcgggtc
aacgacaaggtggtgctgctcgatgatgccgacaataaagccgacagcgcaatacactgg
ctcggtttcgaccgggaagaaaatgtcctgcccgacgatgccggcagccacagggcttac
cgcctgttgcaggaatattttacttttccggaaaagttttatttctttgaagttacccgc
ctgcttgaaaaagaggcgcttagcggtgcaatcgacagctttgaaatcctgtttttgctg
aatgaaaccagcaacggcatttccttaactaaaagcagttttgaagtgaattgttttcct
gccattaacctctttgcccgctcgtttaaaccggtacagctcaagcaaaaccagcacgaa
taccggctgctggcggatgagcgtttctacctgcaatcggaagtgcacagtatcagcgag
gtgcgcagtattgcttttgacggcaaaagcaataccgtcagtgcctggctcggcaccaat
accaaacccacggccaaccagtattatattacccggttaacccagctgctgaccccgggg
gagcgcggctgcgacacctttttgtcgatttatgatgccgacttttccccgagccagccg
atagaccagaccttagtggttaaaggctggtgcaataaccgccgcttgccggaggcgctc
agggtcgggcaaaaaatgcagctggtgggggccggtcctatgctcaacgccgatgtggtg
gaaatgccgacaaaatttaaaggggccagcctggacggggaaaataatatcaagctgtta
tcccagctgtccctgaaccttaatgccttgggggagggggagaaccggctggaattattg
cgccagttgctgcgcttatattgcgaccccaatgccgtttcccatgcccgtcagctcgac
ggcttaaccggcatggcgtccaaagccgtggttaagcgcatcggcaagcagatgtggcgg
ggacattgccgcggtacccgggtttctttgtctatcaatgaagattattttgacggcgcc
aaccccttgctgctcggcgcggtgctcagttatttctttggtttatataccagtttaaat
cattttgtccagctgcagcttatcagcgataaacgtgaaggagtgtggaagcaatggcca
gcgcgcattggcgaacaggttattctgtag

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