Thalassomonas haliotis: H3N35_14865
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Entry
H3N35_14865 CDS
T08805
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
that
Thalassomonas haliotis
Brite
KEGG Orthology (KO) [BR:
that00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
that03400
]
H3N35_14865
DNA repair and recombination proteins [BR:
that03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H3N35_14865
Archaeal homologous recombinant proteins
H3N35_14865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_tran
NTPase_1
AAA_21
CbiA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WDE09615
LinkDB
All DBs
Position
complement(3534501..3538199)
Genome browser
AA seq
1232 aa
AA seq
DB search
MKILSLRFENLNALKGSWKIDFSASPFDSNGLFAITGPTGAGKTTILDAICLALYHQTPR
LTVSDKQNQLMTRNTATCLAEVEFEVKGQGYRAFWSQRRAKNQLDGKLQSPKAELAKLDG
TIVAEKLSVVRAEIARITGLDFGRFTKSMMLSQGQFAAFLNAPANERAELLEELTGTEIY
GLISQKIYEDFKSENEALKLLMAQSQGVSVLTAEQLTEIQQVAEQNQHKEKELLVQQEKA
QQALNWQQQYQQSCAQLAGARDVLVQAQAKENESQDLLLQLQKAEPAEALRSTYEQKQAL
NQVQVQNQLAIDKISAELAVAEEKAGSQNAQLEQLTQEQAAKEQDFIRTETLVLETIIPL
DQAIDSDLGQVNRQQQLLAQVTEKLDGARQQLQQNQGGHKTLLGEYENNSRFIDQHSQYL
QLAEKMPLWQDRFSQINQQVSEQSILGGKIADLDQQLAQARAEHEHQQKNIEQSGVLYQQ
GQEKMQALIEEKQGLLAQHSGFDEQQLANELTRLQGQQAQAGLALQNARRFARLNEQFNE
QEQQSKAISGELSGITAERDLLRQRFSREQQQLSDLDALVSQQQTIMSLSQHREQLQPGH
ACPLCGSKEHPAVQEYASASSSEYQQRQEQQKLLLKEIEKQGTELNNQISKLQGRHDSLL
ENMKVNRREQEELLLNWQQLQQVLQLSCPLSHLEDIEQVLLSNEAKLGSLTAQNQQLQQL
NQQLHQQQQAVTELDKQVMALQNQFDLLAGKVSFDVNALVQMKEQYQQQQASLEQIRGVL
TDELNAFELDYPAQETFASWWQQQSTKVENYQQAVIRQGVQKEQLGAHQQSLAVQEEQVR
YLSEQQQQAQVLFNQHQALLGHKKAQRQELFGKQRVSEVRADIQGQRKALEQQLLSYQQA
LNGVRQQVKLLQGQLQVSQQQLQQGEEQFSTVQGQWQSQLTASPFGSESDFLAALLPEEK
RRELTRLKQQITEDIQQAQTLVNQGQQANEKLLAAKAGFGEDLDNIQVLQQQLDSLQQAL
KQLQQKQGELNQKLAHDRQLREQQADILRQIADKQEQLEDLSCLNAMVGSADGAKFRRFA
QGLTLAHLVYLANLQLERLHGRYQLQCQQNDALALEVLDTWQGDTVRDTKTLSGGESFLV
SLALALALSDLVSAKTSIDSLFLDEGFGTLDNDTLEIALDALDNLNASGKMIGVISHVET
LKERIAVQIKVKKFNGLGVSELQSQFKYTPEH
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctaagcctgcgttttgaaaacctcaatgccttaaagggcagctggaagatc
gactttagcgcctcgccgtttgacagcaacgggctttttgccattaccggtcccacaggt
gccggaaaaaccacaatattagatgccatttgcctggccctttatcatcagaccccgaga
ctgacggtatcggataagcaaaaccagctgatgacccgcaataccgccacttgtctggcg
gaggtggaatttgaagttaaaggccaggggtatcgcgccttttggagccagcgccgggct
aaaaaccagctggacgggaagttacaatcacccaaggccgaactggccaaacttgacggt
actattgttgcggaaaaactttctgtggtgcgcgctgaaattgcccgtattaccggactg
gactttggccgctttaccaagtctatgatgttatcccaggggcaatttgccgctttttta
aatgccccggccaatgagcgggccgagctgttggaagagctcaccggcacggaaatttat
ggcctgatctcacaaaagatctatgaagactttaaaagtgaaaatgaagcattaaagctc
ctgatggcgcaaagccagggggtatcggtactgacagcggagcagttaaccgagatccaa
caagtagctgaacaaaaccagcacaaggaaaaagagcttttggtgcagcaggaaaaagca
caacaggcgctgaactggcagcaacaatatcaacaatcttgtgcgcaattggccggtgcc
agggatgtcctggtgcaggcgcaagcaaaagaaaatgagtcacaagacttgttgcttcag
ctgcaaaaggcagagcctgccgaagcgctgcgcagtacttatgagcaaaaacaggccctt
aaccaggtccaggtgcagaatcagctggcgatcgacaaaattagcgctgagttagcggtt
gccgaagaaaaagccggcagtcagaatgcgcaattagagcagcttacccaagagcaggcc
gctaaagagcaggattttatccgcaccgaaactttagtgctcgaaaccattattcccctg
gatcaggcgattgattcagatctcggccaggttaaccgccagcagcaactgctggcacaa
gtgacagaaaaactcgacggcgcccggcagcaattacagcagaaccagggcgggcataaa
accttgcttggcgagtatgaaaacaacagccgttttatcgaccagcactcccagtatctg
caactggcggaaaaaatgcccttatggcaggacagatttagccaaatcaaccagcaagtc
agtgagcaaagcattcttggcggcaaaatagccgatcttgaccagcagctggcccaggcc
cgggctgagcatgagcatcagcaaaaaaacattgagcaaagcggtgttttataccagcag
gggcaagagaaaatgcaggcccttattgaagaaaagcaagggctgttggcgcagcatagc
ggctttgacgaacagcaactggcaaacgagctaacccggctgcaggggcagcaagctcaa
gcgggactggcactgcaaaatgcccggcgttttgcccggcttaacgagcaattcaacgag
caagagcagcagagcaaagcaattagcggcgaattatccggtatcaccgccgagcgggat
ctattaaggcagagattttcccgggagcagcaacagctcagcgatttagatgccctggta
tcccagcagcaaaccataatgtccttgtctcagcacagggagcagttacaaccgggtcat
gcctgtccgttatgcggctcgaaggagcatccggctgtgcaggaatatgccagtgcgagc
agcagtgaatatcagcaaaggcaagagcagcaaaaactgctgctaaaggagattgagaaa
cagggaactgagctgaataatcaaatcagcaagctccagggccgccatgacagtttgctc
gaaaacatgaaagttaatcgccgggagcaggaagagttgctgcttaactggcagcaatta
caacaggtgttgcagctttcctgtccgctcagtcatctggaggacattgagcaagtcttg
ctcagcaatgaggcaaaactgggctccctgacggcacaaaatcagcaattacagcagctg
aaccagcaattacatcaacaacagcaagcggtaactgagttggacaagcaggtgatggcg
ctgcaaaaccagtttgatttattggcggggaaagttagctttgatgtcaatgcccttgtc
cagatgaaggagcagtaccagcaacagcaagcatcgcttgagcaaataaggggcgtatta
accgatgagctgaacgcattcgagttagactatccggcgcaggaaacctttgctagctgg
tggcagcagcaaagcactaaggtagaaaactaccaacaagccgtcatccgccagggagtg
caaaaagagcagctgggggcacatcagcaaagtttggcggtacaggaagagcaggtgcga
tatttaagcgagcagcagcaacaggcacaagttttatttaaccaacatcaagcgttgctt
gggcataaaaaggctcagcggcaggagttgtttggtaaacagcgggtgagcgaggtcagg
gcggatatccagggacagcgtaaggcactggagcagcagttactcagttatcagcaggct
cttaatggtgtccggcaacaggtgaaattattgcagggacagttgcaggtgagccagcaa
cagttacagcagggagaggagcaattctcaactgtgcaggggcaatggcagtcacagctg
acagccagtccgttcgggtcagaaagtgattttcttgccgctttgttaccagaggaaaaa
cgccgggagctcacccggttaaagcagcaaattactgaggatatccagcaggcgcaaacc
ctggttaatcaggggcagcaagcgaatgaaaaactgttggccgcaaaagccggttttggt
gaagacctggataatatccaggtgttgcagcagcaactcgatagcttgcagcaagcgctt
aagcagttgcagcaaaagcagggagagcttaaccagaaacttgcccatgaccggcagctg
cgggagcaacaggcggatattctccggcaaatagcggataagcaagagcagctggaagac
ttgtcctgcctcaatgctatggtaggctctgccgacggggcgaaatttcggcgctttgcc
caagggctaaccttggcccacctggtttatctggcgaatttacagcttgagcgcttacat
ggccgctatcagctgcaatgccagcaaaatgatgccctggcgctggaagtactcgatacc
tggcagggggatactgtccgggataccaaaacgctatccggcggggaaagctttctggtg
agtctggcgctggcgctggcattatcggatttggtgagcgccaaaaccagtatcgactcc
ctgtttctggatgaaggctttggcactttagataacgataccttggaaattgccctggac
gccctggataacctcaatgccagcggcaagatgatcggggtgatcagccatgtggaaacc
ttaaaggaaagaattgcggttcaaattaaagtgaaaaaattcaatggactgggcgtaagt
gaactgcaaagccagttcaaatatacccctgagcattaa
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integrated database retrieval system
