Thalassomonas haliotis: H3N35_14915
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Entry
H3N35_14915 CDS
T08805
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
that
Thalassomonas haliotis
Brite
KEGG Orthology (KO) [BR:
that00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
that03032
]
H3N35_14915 (ihfB)
03036 Chromosome and associated proteins [BR:
that03036
]
H3N35_14915 (ihfB)
03400 DNA repair and recombination proteins [BR:
that03400
]
H3N35_14915 (ihfB)
DNA replication proteins [BR:
that03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H3N35_14915 (ihfB)
Chromosome and associated proteins [BR:
that03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
H3N35_14915 (ihfB)
DNA repair and recombination proteins [BR:
that03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
H3N35_14915 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
UPF0181
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
VWA_3
HU-DNA_bdg
CEP76_N
NGO1945_C
Motif
Other DBs
NCBI-ProteinID:
WDE09625
LinkDB
All DBs
Position
complement(3546154..3546441)
Genome browser
AA seq
95 aa
AA seq
DB search
MTKSELIERLAEKLNHLSAKDVEQAIKEILEMMAQSLSKGERIEIRGFGSFSLHFRAPRV
GRNPKTGDAVELSGKYVPHFKPGKELRERVNLSHA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaactcattgaaagattggcagaaaaattaaaccatttgtctgctaaa
gatgtcgaacaagctattaaagaaattcttgaaatgatggcgcaatctttgtcaaaaggt
gagcggatagaaataagaggctttggtagtttttcgctacattttcgtgctcctcgagta
ggcagaaaccctaaaacgggtgatgccgtagagctatccgggaaatatgttccacatttt
aaacctggtaaagaattacgggaaagggtcaacctttctcatgcttaa
DBGET
integrated database retrieval system
