Thalassomonas haliotis: H3N35_16705
Help
Entry
H3N35_16705 CDS
T08805
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
that
Thalassomonas haliotis
Pathway
that03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
that00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H3N35_16705 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
that03400
]
H3N35_16705 (uvrB)
DNA repair and recombination proteins [BR:
that03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H3N35_16705 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H3N35_16705 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
DUF87
Ish1
AAA_22
AAA
UB2H
Motif
Other DBs
NCBI-ProteinID:
WDE14559
UniProt:
A0ABY7VN75
LinkDB
All DBs
Position
complement(3970128..3972143)
Genome browser
AA seq
671 aa
AA seq
DB search
MMKSLELVSEYTPGGDQPGAIKQLLEGVDAGLAHQTLLGVTGSGKTFTVANVIAELNRPT
MMLAPNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNEHIE
QMRLSATKALLERRDVIIVASVSAIYGLGDPDSYLKMMLHLRVGDIINQRDILRRLAELQ
YTRNDMAFQRATYRVRGDVIDIFPAESDRLALRVELFDEEIERISQFDPLTGSVEQVLAR
VTVYPKTHYATPREKILAAVEQIKVELKHRSQQLKDNNKLVEEQRVVQRTQFDIEMMTEL
GYCSGIENYSRYLSGRAEGEAPPTLFDYLPDDGLLIIDESHVTVPQIGAMYKGDRSRKEN
LVEYGFRLPSALDNRPMKFDEFEALAPQTIYVSATPSNYEVDKSGDEIAEQVVRPTGLLD
PEIEVRPVETQVDDLLSEINKRVAINERVLATTLTKRMAEDLTDYLDEHGIKTRYLHSDV
DTVERVEIIRDFRLGKFDVLIGINLLREGLDMPEVSLVAVLDADKEGFLRSERSLIQTIG
RAARNVNGRAILYAARITGSMKKAIEETERRREKQHQFNLDNNIVPRGVKRKITDVMDVD
TANFDPLTAEEGARLVAEQKAGYKVLSTHEIDEKVKQLENAMYQHAQNLEFEQAAAVRDE
IAKLREQQLAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
ctgatgaaatctttagaactcgtatctgaatatactccggggggagatcaacccggtgcc
atcaagcagttgcttgaaggggtagatgccggtttggcccatcagactttactcggggta
accggctcgggtaaaacctttaccgtggccaatgttattgccgagcttaatcgcccgact
atgatgctggcgccgaataagactttggcggcgcagctttacggggaaatgaaggagttc
ttccccaacaatgccgttgagtattttgtttcttattatgattattatcagccggaagcc
tatgttccgactacagatacctttatcgaaaaagatgcctcggttaatgaacatatagag
cagatgcggctgtcggccaccaaggccttgctggagcgccgtgacgttattattgtcgct
tctgtgtctgccatttatggtttgggtgatcccgactcttatttgaaaatgatgttgcac
ctgcgggtgggagacattattaaccagcgcgatattttgcgtcgccttgccgagctgcaa
tatacccgaaacgatatggccttccagcgggcgacctaccgggtgcgcggtgatgttatt
gatattttcccggcagaatccgatcgcctggcgttaagggttgagctttttgatgaagaa
atcgagcgtatcagccagtttgatcccttaaccggcagtgtcgagcaggtactggcccgg
gtgactgtctatccgaaaactcattatgccacccccagggaaaaaattctcgcggcggtt
gagcaaatcaaggttgagcttaagcacagatcccagcagcttaaagacaataataagctg
gtggaagagcaacgtgtggtacagcgcacccagtttgatattgagatgatgaccgaactt
ggttactgctcgggtatcgaaaactattcccgttatttatccgggcgcgcagaaggggag
gcgccgccgaccctgtttgattatttgcccgacgacggtttgctgatcatagatgagtct
catgtcaccgtaccgcaaatcggcgccatgtataaaggggaccgttcccgtaaggaaaac
ctggtggaatacggattccgcctgccgtcggcgctggataaccggccgatgaaatttgat
gaatttgaagcgctggcgccgcaaaccatttatgtctcggcgaccccgagcaattatgaa
gttgataagtccggtgatgaaatcgccgagcaggtggtcaggcccaccggcttgttggat
ccggaaattgaagtgcgcccggtggaaacccaggtggatgacttgttatcggaaatcaat
aaacgggtagcaatcaacgagcgggtactggcaaccaccttaaccaaacgtatggcggaa
gatcttaccgattacctggatgaacacggcattaaaacccgttacctgcactcggatgtt
gataccgtcgagcgggtagaaattatccgcgacttccgtttaggtaagttcgatgtactc
atcggcattaacttactccgggaaggcctggatatgccggaagtctccctggtcgcagta
ttagatgccgacaaggaaggtttcctgcgctctgagcgctctttgatccaaaccataggc
cgcgccgcccgtaacgtcaacggccgggctatcttatatgccgcccgcattaccggttca
atgaaaaaagcgatagaagaaaccgagcgccgccgggaaaaacaacatcagtttaacctc
gacaataatattgtgccgcgcggggtaaaacgcaaaattaccgatgttatggatgttgat
accgccaactttgatccgttaacggccgaagaaggcgcacgtttggtggcggaacaaaaa
gcgggttataaagtcttatccacacatgaaattgatgagaaggttaagcagcttgaaaac
gccatgtatcaacatgcacaaaacttagagtttgaacaagctgccgcagtcagggatgaa
attgctaaactcagagagcagcaattagccagctag
DBGET
integrated database retrieval system
