Thalassomonas haliotis: H3N35_22500
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Entry
H3N35_22500 CDS
T08805
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
that
Thalassomonas haliotis
Pathway
that00550
Peptidoglycan biosynthesis
that01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
that00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H3N35_22500 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
that01003
]
H3N35_22500 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
that01011
]
H3N35_22500 (mrcB)
Enzymes [BR:
that01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
H3N35_22500 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
H3N35_22500 (mrcB)
Glycosyltransferases [BR:
that01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
H3N35_22500 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
that01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
H3N35_22500 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
DUF1151
UvrB_inter
Tlde1_dom
Motif
Other DBs
NCBI-ProteinID:
WDE10980
UniProt:
A0ABY7VC89
LinkDB
All DBs
Position
complement(5237833..5240169)
Genome browser
AA seq
778 aa
AA seq
DB search
MAKKKAASSKKNNSKKPQAKAAVSSRSWLSWLFFTGLKLALVGILALGGYAIYLDGKVRR
TFEGQKWQVPVQVYGQVETLQPGERLDLPALAASLTYNGYQKVAKVHRAGQFALSKKRII
IFRRAFDFGSGIEPVAELTVDVSQGKISGLYQGSEQAGQLLLEPVLLDRIVPENKEDRVL
VGLENVPEALLDTLLLVEDRDFYFHAGVSPLGILRALVQNIRAGRTVQGGSTLTQQLVKN
MFLTRQKTLWRKVNEALMSLILEYRYSKDQLLEAYVNEVYLGQHYANGIYGFGLAAKFYF
GKSVAQLDVGEMALLIGQIKGPSYYDPWRYPERAKTRRDLILRLMYEHHLISQPDFETAL
NDPLSVRKSRRLVKQKYPAYLQQVKRELSRHLENYRELSDIKVFTGFSHRSQALLEQTIT
KRLAALEKNSGQQELQAAMLVTDIASGEIRALSGGRKSNYSGFNRALNARRPVGSLIKPA
VYLAALERYEEYNFATVLDDKAITLASDGGKEWRPKNYDGKYREQVSLIDSLVLSLNIPT
VNLGMSLGLDAVADAIHLLGYQQDITTRPSMLLGSINMSPMEINQLYLPIAAQGSYQQAH
TITRIVSGQGESLWQFERPAEPRMSENAAFLLDYALEQVTQRGTARSLSWRLKDKQVAGK
TGTTNDLRDSWFIGYDARHLVTTWVGRDDNKSMGLTGSSGALVLFADFLKQQGVVDKQQV
MPQGIAMTLFERQSGNAVTDECDNTELYPAISLAIRVNENCLQKRPDTRSWLERLLGK
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaaaaaagcagcaagcagtaaaaaaaataacagcaaaaaaccgcaggcaaaa
gccgctgttagcagcaggagctggctaagctggctgttttttaccgggttgaaattagcc
ctggtggggatactggccctgggggggtatgccatttatcttgacggcaaagtccgccgt
acctttgaagggcagaaatggcaggtgccggtgcaggtttatggccaggttgaaaccctg
cagccgggagagcggctggacttaccggcgctggcggcttcgctgacttacaacggttat
caaaaagtggccaaggttcaccgggcggggcaatttgccttatcgaaaaagcgcatcatt
atttttcgccgcgcctttgattttggctcgggcatcgaacctgtcgccgagttaaccgtg
gatgtcagccaggggaaaatttccggattatatcagggcagcgagcaggcagggcagttg
ctgcttgagccggtattgctggaccgcattgtgccggaaaataaggaagacagggtcttg
gtggggctggagaatgttcccgaagccttgcttgatacgctgttgctggtggaagacagg
gatttttattttcatgccggggtttcaccgctggggatcttacgggccctggtgcaaaac
attcgggccgggcgtacggtgcaggggggcagtaccctgacccaacaactggttaaaaac
atgttcctgacccggcaaaaaacattgtggcgtaaagtgaatgaagccttgatgtcgctt
atcctggaatacaggtacagcaaagatcagttgctcgaagcctatgtcaatgaagtttat
ctcggccagcattatgccaatggcatttatggtttcggcctggcggcaaaattttatttc
ggcaaaagtgttgctcagctcgatgtcggagaaatggcattattgatcggccagatcaaa
gggccaagctattatgatccctggcgttatcccgagcgcgccaaaacccggcgcgacctt
attctcaggttgatgtatgagcatcatttaatcagtcagccggattttgaaacggcgctt
aacgatcccctgtcggtgcgaaagtcccgccgcctggtgaaacaaaaatacccggcttat
ttgcagcaggttaaacgcgaattatcccggcacctggaaaactaccgggagttgtcggat
attaaagtctttaccggcttttcccaccgcagccaggctttattggaacagaccatcact
aaacggttggcggcgctggaaaaaaacagcggtcagcaagagttgcaggcggcgatgctg
gtgaccgatattgccagcggagaaatccgggcattaagcggcggccgcaaaagcaattat
tccggcttcaaccgggcactaaacgccaggcgtccggtggggtctttgatcaaacccgcg
gtttatttggcggcgctggaaaggtatgaagaatataactttgctaccgtacttgatgac
aaggccattaccctggccagcgacggcggcaaagagtggcggccgaaaaactatgacggc
aagtaccgggagcaggtctctttaattgacagcctggtattgtcattaaacattcctacc
gtgaacctgggcatgtctttggggctggacgcggttgccgacgctattcatttgctcggt
taccagcaggatattaccacccggccgtcgatgttgctgggctccatcaatatgtcgccg
atggaaatcaaccagctttatttacccattgccgcgcagggcagttatcagcaagcgcac
accatcacccgtatcgtttccgggcagggagagagcttatggcagttcgagcgcccggct
gaacccaggatgtcggaaaacgccgcctttttgctggattatgccctggagcaggtcacg
cagcggggcacggcacgctcccttagctggcgcttgaaagacaagcaggtggcgggtaaa
accggcaccaccaatgatttacgcgacagctggtttatcggctatgatgcccgccacctg
gtcaccacctgggtcggccgtgacgataacaaatccatgggccttaccggcagcagcggc
gccctggtattatttgccgattttttaaagcaacagggggttgtcgataaacagcaagtg
atgccgcaggggatcgccatgaccttgtttgaacgccaaagcggcaatgcggtcaccgat
gaatgcgataataccgaactctatccggccatcagcctggctattagggtaaatgaaaat
tgtctgcagaaacgtcctgatacccgctcctggctggagcgtctgcttggtaaataa
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