Thalassomonas haliotis: H3N35_22660
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Entry
H3N35_22660 CDS
T08805
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
that
Thalassomonas haliotis
Pathway
that03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
that00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H3N35_22660 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
that03019
]
H3N35_22660 (groL)
03110 Chaperones and folding catalysts [BR:
that03110
]
H3N35_22660 (groL)
03029 Mitochondrial biogenesis [BR:
that03029
]
H3N35_22660 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
that04147
]
H3N35_22660 (groL)
Enzymes [BR:
that01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
H3N35_22660 (groL)
Messenger RNA biogenesis [BR:
that03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
H3N35_22660 (groL)
Chaperones and folding catalysts [BR:
that03110
]
Heat shock proteins
HSP60 / Chaperonin
H3N35_22660 (groL)
Mitochondrial biogenesis [BR:
that03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
H3N35_22660 (groL)
Exosome [BR:
that04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
H3N35_22660 (groL)
Exosomal proteins of other body fluids (saliva and urine)
H3N35_22660 (groL)
Exosomal proteins of breast cancer cells
H3N35_22660 (groL)
Exosomal proteins of colorectal cancer cells
H3N35_22660 (groL)
Exosomal proteins of bladder cancer cells
H3N35_22660 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
TolA_bind_tri
Motif
Other DBs
NCBI-ProteinID:
WDE11010
LinkDB
All DBs
Position
complement(5273723..5275375)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVLFGNDARVKMLNGVNILADAVKVTLGPKGRNVVLDKSFGGPAITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIVNEGLKSIAAGMNPMDLKRGI
DKAVLAAVEELKGLSQECSDNKAIEQVGTISANSDSSVGEIIATAMDKVGTEGVITVEEG
QALTDELDVVEGMQFDRGYLSPYFINNQESGSVELENPFILLVDKKVSNIRELLTTLEGV
AKAGKPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTV
ISEEIGMELEKATLEDLGQAKRVVISKDNTTIIDGIGEEADIQSRVAQIRGQIEDSSSDY
DKEKLQERLAKLAGGVAVIKIGAATEIEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RAADKIKALEGSNEDQTHGINVAIRAMEAPLRQIVNNCGDEASVVLNEVRNGEGNFGYNA
GNSTYGDMLEMGILDPTKVTRSALQFAASVAGLMLTTEAMVTDAPVKDAPAPAMPDMGGM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagacgttttatttggaaatgacgcacgcgtaaaaatgctaaacggtgta
aatattttagccgacgcggtaaaagtgactttaggccctaaaggccgcaatgtagtatta
gacaaaagctttggtggtccggccatcactaaagacggtgtttccgtggcaaaagaaatc
gaattagaagataaattcgaaaacatgggcgcacaaatggtgaaagaagttgcttctaaa
gccaatgacgaagcgggtgacggtaccacaactgctactgtattagcccaagcgattgtt
aacgaaggtttaaaatctattgccgccggcatgaatcctatggatctgaaacgcggtatc
gacaaagccgttttagctgccgtggaagagctgaagggcctttctcaagaatgttcagac
aacaaagccattgaacaggttggtactatttctgccaactctgacagctcagtaggtgaa
atcatcgctactgccatggataaagtgggcaccgaaggtgttattaccgttgaagaaggt
caggcattaacagatgagctggacgttgttgaaggtatgcagtttgaccgcggttacctg
tctccttatttcatcaacaaccaggaaagcggctcagttgaactggaaaaccctttcatc
ctgttggtagacaagaaagtttctaacatccgtgaactgttaaccacgttagaaggcgta
gctaaagccggtaagccgttgcttatcattgccgaagatgttgaaggcgaagccttagcc
accttagtggttaacaacatgcgcggtatcgtcaaagttgctgcggttaaagcgccaggt
tttggtgaccgtcgtaaggcgatgttacaagacatcgctaccttaactgccggtactgtg
atttctgaagaaatcggtatggaactggaaaaagcaactttagaagacttaggtcaggcg
aaacgtgttgttatctctaaagacaacactactatcatcgacggtatcggtgaagaagcc
gacatccaaagccgtgtcgcacaaattcgcggccagattgaagactcttcttcagactat
gacaaagaaaaactgcaagagcgcttggctaaattagccggcggtgttgccgtgatcaag
atcggtgctgccaccgaaattgaaatgaaagagaaaaaagcccgcgtagaagacgccttg
cacgcaacccgcgccgcggttgaagaaggtgtggttgccggtggtggtgttgccctggta
cgcgccgctgacaagattaaagcccttgaaggcagcaacgaagatcagacgcatggtatc
aatgttgccatccgcgccatggaagcgccacttcgccaaatcgtgaacaactgtggcgac
gaagcctcggtagtattgaacgaagtacgcaacggcgaaggcaacttcggttacaacgca
ggtaacagcacttacggcgatatgttggaaatgggtatcctggatccgactaaagtgacc
cgtagcgccttacagttcgcagcttctgttgccggtttaatgttaaccacagaagccatg
gtaaccgatgccccggttaaagatgctccagccccagctatgcctgatatgggcggcatg
ggcggtatgggcggcatgggcggcatgatgtaa
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