Thalassomonas haliotis: H3N35_23870
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Entry
H3N35_23870 CDS
T08805
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
that
Thalassomonas haliotis
Pathway
that00300
Lysine biosynthesis
that00470
D-Amino acid metabolism
that01100
Metabolic pathways
that01110
Biosynthesis of secondary metabolites
that01120
Microbial metabolism in diverse environments
that01230
Biosynthesis of amino acids
Module
that_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
that00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H3N35_23870 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H3N35_23870 (dapF)
Enzymes [BR:
that01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
H3N35_23870 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
WDE11229
UniProt:
A0ABY7VDM5
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Position
complement(5557130..5557951)
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AA seq
273 aa
AA seq
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MKFTKYHALGNDYLVVDPKEVNRLSQDDIITLCHRHYGIGSDGVLYGPLPGNSCDFALKI
FNPDGSEAEKSGNGLRIFSRYLWDRQLVSSKPFFIETPGGVVSASVCPSGKSVTVEMGQV
AFSHKVSEAATAAPEDILVLGKTFTGYRANVGNPHFVILVDELTPKLATTYGPLIESAAG
FSNRTNVQFVKVLEQGKIQVEIWERGAGYTLASGSSSVAAAAVVHCLGLCREKISVLMPG
GVIEITLDVRFNASMTGVVAKIAEGTLSQEALS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttactaaatatcatgctttaggtaatgattacctggtggtcgatccaaaagag
gttaaccggctcagccaagatgacattatcaccttatgccatcgccactacggcataggt
tcagacggggtactttatggccctttgccgggtaacagctgcgattttgccttaaagatc
tttaaccccgacggcagcgaagcggaaaaaagtggcaatggtttgcgaattttttcccgt
tacctttgggatcgccaattggtctccagcaagcctttttttattgaaacccccggtgga
gtagtttcagcctccgtttgcccgtcgggaaagtcagtcacggtggagatgggacaagtc
gcttttagccataaggtttcggaagctgctaccgcggcccccgaagatattcttgtcttg
ggtaaaacgtttaccggttatcgggctaatgtcggtaaccctcattttgttattttagtt
gatgagttaacgcctaagctggcgacaacatatgggccgctaatcgaatctgctgctggt
tttagtaacagaacgaatgtccagtttgttaaagtcctggaacaggggaaaatacaggtt
gaaatatgggagcggggcgccggttataccctggcgtccggtagcagtagtgttgcggca
gcggctgttgtccattgtctgggtttgtgtcgggagaaaatttcggtgctaatgcccggt
ggggttatcgagataacactggatgtacggtttaatgcgtcgatgaccggggtcgtggct
aaaattgcagagggcactttaagtcaggaagctttatcttaa
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