Thalassomonas haliotis: H3N35_25600
Help
Entry
H3N35_25600 CDS
T08805
Symbol
birA
Name
(GenBank) bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
that
Thalassomonas haliotis
Pathway
that00780
Biotin metabolism
that01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
that00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
H3N35_25600 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
that03000
]
H3N35_25600 (birA)
Enzymes [BR:
that01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
H3N35_25600 (birA)
Transcription factors [BR:
that03000
]
Prokaryotic type
Helix-turn-helix
Other families
H3N35_25600 (birA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
HTH_11
BPL_LplA_LipB_2
GntR
HTH_5
MarR_2
HTH_20
HTH_DeoR
Mga
HTH_36
HTH_24
HTH_Crp_2
Rrf2
Fe_dep_repress
RP-C
Motif
Other DBs
NCBI-ProteinID:
WDE11541
LinkDB
All DBs
Position
complement(5980769..5981758)
Genome browser
AA seq
329 aa
AA seq
DB search
MSKSLREHLIRQLADGEFVSGETLGQQFGVSRAAVSKHINALAEMGLDIFRVSGKGYKLA
QPLDLLNSDKIRAILTANGLENMLEVHNLIDSTNSYLLRRLPNNLKQGQVCIAEYQSAGR
GRRGRQWISPFGSHVYLSMYWQLEQGMSAAMGLSLVTALAVSDAINELFNIEVQLKWPND
IYMSGVKLAGILIDLEGQALGACHSVIGIGLNLAMPQQSAEQVDQPWTDLKSHTQAALDR
NMLCSAIIKCLTRRLEQHKAFGLTPMLDEWLQQDFYLNKPVKLLTGERVTSGICRGINNQ
GALLLETGGQVKAIYGGEVSLRADNDRIN
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtctttaagagaacatttgatccggcaattagccgatggtgaatttgtctca
ggtgaaaccctggggcagcagtttggcgtcagccgggcggctgtttcaaaacatattaat
gcattagctgaaatgggtttggatattttccgggtgagcggtaaaggttacaaattagct
caaccattggatttattaaatagtgataagatcagggcaatattaactgcgaatggattg
gaaaatatgctagaggttcataacctgatagattctaccaatagctatttattgcgccgc
ttacccaataaccttaaacaaggtcaggtttgcattgccgaatatcaaagcgccgggcgg
gggcgcagaggcaggcagtggatctccccttttggctctcatgtctatttgtctatgtat
tggcagcttgaacagggcatgtcggcggcaatgggcttgagcctggtaacagcgttggcg
gtgagtgatgccattaatgaattgtttaatatagaagtgcaattgaaatggccaaatgat
atttatatgtctggcgtgaaactggcagggatattaattgaccttgaagggcaggcatta
ggtgcttgccacagtgttatcggtatcggacttaatctggcgatgccgcagcaaagtgcg
gagcaggttgatcagccctggacggatcttaaatctcatacacaggcagcattagatcgt
aatatgctgtgttcggcgattattaaatgccttacccggcggcttgagcaacataaggca
tttggtttaacgccaatgttggatgagtggttgcaacaggacttttacctgaataagccg
gtaaaattgctcaccggcgagcgggttacttcggggatttgccggggcatcaataaccag
ggggctttgttactggaaactggcggtcaggttaaggcgatttacggtggagaagtgagt
ttaagggcggataatgatcgcattaattga
DBGET
integrated database retrieval system
