Thalassomonas haliotis: H3N35_26820
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Entry
H3N35_26820 CDS
T08805
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
that
Thalassomonas haliotis
Pathway
that03420
Nucleotide excision repair
that03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
that00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H3N35_26820 (uvrD)
03430 Mismatch repair
H3N35_26820 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
that03400
]
H3N35_26820 (uvrD)
Enzymes [BR:
that01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H3N35_26820 (uvrD)
DNA repair and recombination proteins [BR:
that03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H3N35_26820 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
H3N35_26820 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
PhoH
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
WDE11763
LinkDB
All DBs
Position
complement(6248420..6250597)
Genome browser
AA seq
725 aa
AA seq
DB search
MDVSELLDGLNDQQREIVAAPLQNMLVLAGAGSGKTRVLVQRIAWLMKVEQASSHAVLAV
TFTNKAAAEMRSRVEQVVDGNVHGMWVGTFHGLAHRLLRMHFQEANLPQAFQVLDSDDQL
RLVKRIIRSLNLDEKRWPAKQVQWYINGKKDEGIRPHHIDTQFDPTEQTFVQIYSTYQQA
CDRAGLVDFAELLLRAHELWLNNPVLLSHYQQRFAHILVDEFQDTNAIQYAWLTMLGKAR
SNVMIVGDDDQSIYGWRGAKIENIQRFLKDFEQAKTIRLEQNYRSTANILNAANKLIANN
NNRLGKELWTQIDAGEKISIYTAFNEIDEARFIAGRIEAWREDNGSLDQVAILYRSNAQS
RLLEEALLQAQLPYRIYGGLRFFERQEIKDALAYMRLINNRDDDAAFERIINTPTRGIGN
QTLAIVRDAAKSLETTLWQACQQMLSSGQLKGRSAKTIGLFIELIDSLEDDSSHLDLDQQ
ANFVISNSGLKAMYQAEKGERAEARIENLNELVTACQTFEMDPELEDEQSQLTAFLTHAA
LESGESQADDYEAAVQLMTMHSAKGLEFPLVFIAGIEEGMFPSQQSVEDISRLEEERRLC
YVGMTRAMNKLYLCHAESRRLYGQEKYHKPSRFIRELPESCIEEIRLQSQVSRPATTGRF
SSTFTTESFENTGFTLGQRVQHSKFGEGVVLNYEGSGAQSRIQVNFDGLGSKWLVVAYAN
LQPIT
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttccgagttacttgatggcttaaacgaccagcagcgggaaattgtcgctgcc
cctttgcaaaatatgttggtgcttgccggtgccggtagcggaaaaacccgggtactggta
cagcgcattgcctggctgatgaaagtcgagcaggcctcttcccatgcggtattggcggta
acctttaccaataaggcggcggcagaaatgcgctcccgggtcgagcaggttgtcgacggc
aatgtccacggcatgtgggtcggcactttccatggcctggcgcaccgcttgttaaggatg
cattttcaggaagccaacttaccccaggcgttccaggtactcgattcagatgatcaactg
cgcctggtcaaacgcatcatacgttcgttgaatctggatgaaaaacgctggcccgccaag
caggtgcagtggtatatcaacggcaagaaagacgagggcatcaggccccatcatatcgat
actcagtttgatcccaccgaacaaacctttgtccagatttacagtacctatcagcaggcc
tgtgaccgcgccggcttagtggactttgccgaactgctactgcgggcccatgagctctgg
ctcaataatcccgtgctgctgagccattatcagcaaaggtttgcccatatcctggtggac
gaattccaggataccaatgccatccagtacgcctggttaactatgctgggcaaagcgcgc
agcaatgtgatgatagtcggcgatgacgaccagtccatttatggctggcgcggggcgaaa
atcgagaatatccaacggtttttaaaagacttcgaacaggcgaaaaccatacggttggag
caaaattaccgctcaaccgccaatatcctcaacgccgccaataaattgatagccaacaac
aataaccgtttaggcaaggagttatggacccagattgatgccggtgaaaagatttccatt
tataccgcttttaatgaaattgatgaggcacgctttattgccgggcgcatcgaggcgtgg
cgcgaggataacggctctttggatcaggttgccattttataccgcagcaatgcccagtcc
cgtttgctggaagaagccttgttgcaggcgcagctgccctatcgcatctacggcggttta
aggttcttcgagcgccaggaaattaaggatgccctggcgtatatgcgattgatcaacaac
cgcgacgatgacgccgcctttgagcgtattatcaataccccgacccggggcataggcaat
cagactctggccattgtccgtgatgccgccaagagtctggaaaccactttatggcaggcc
tgtcagcaaatgttgagcagtggccagcttaaggggcgcagtgcgaaaaccataggactg
tttattgaattgatcgacagccttgaagacgattccagccatctggatctcgatcagcag
gccaattttgtcatcagcaacagtggtttaaaagccatgtaccaggcggaaaaaggcgag
cgtgccgaagcccggatagaaaaccttaatgagctggtcaccgcctgccagacctttgaa
atggatcccgagctggaagacgaacaaagccagttaacggccttcttaacccatgcggca
ctggagtccggtgagtcgcaggcagatgattatgaggctgcggtgcagctgatgactatg
cactccgctaaaggcctggagtttccgctggtatttattgccggcattgaagaaggcatg
ttcccgtcccagcagtcggtggaagatatcagtcggctggaagaagagcgccgcctgtgt
tacgttggtatgacaagggccatgaacaaactatacttatgtcatgccgaaagcaggcgg
ctatacgggcaagaaaaatatcataagcccagtcgctttatcagggaattacccgagtct
tgcattgaagaaattcgtttgcaaagccaggtttcccgtccggcaacaacaggacgtttt
tcatcgacctttactacagagtcttttgaaaacacgggatttaccttgggtcagcgggta
caacacagtaagtttggcgagggtgtggtgcttaattatgaaggcagcggcgcacaaagc
cgtatccaggtgaattttgacggtttgggcagtaaatggttggtagtggcctatgcgaat
ttacaaccaataacataa
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integrated database retrieval system
