Thalassomonas haliotis: H3N35_26840
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Entry
H3N35_26840 CDS
T08805
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
that
Thalassomonas haliotis
Pathway
that00300
Lysine biosynthesis
that00470
D-Amino acid metabolism
that01100
Metabolic pathways
that01110
Biosynthesis of secondary metabolites
that01120
Microbial metabolism in diverse environments
that01230
Biosynthesis of amino acids
Module
that_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
that00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H3N35_26840 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H3N35_26840 (lysA)
Enzymes [BR:
that01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
H3N35_26840 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WDE11767
LinkDB
All DBs
Position
complement(6253074..6254321)
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AA seq
415 aa
AA seq
DB search
MDYFIRKDNTLFAEECRVAELAKSYGTPLYVYSRATIERHWHAFDDAAGEQPHLICYAVK
ANSNLAILNLLARLGSGFDIVSKGELARVLAAGGDAAKVVFSGVAKKSDEIRYALEQGIY
CFNVESAPELARINRVAGELGVKAPVSLRVNPDVDAGTHPYISTGLKENKFGISIEDAEA
LYLAADNLPHLEVKGIDCHIGSQLTELTPFLDALDRVLVLINKLAATGIKLSHLDVGGGL
GVCYRDETPPHPKEYAKALAEKLAGYDLTLLYEPGRAIMANAGILVTEVEFLKTNQDRHF
AIVDAAMNDLIRPSLYQSWQEIIPVEQRRDVDELSYDVVGPVCETGDFLGKDRLLAIKPG
DLLAVRSAGAYGFTMSSNYNSRPRAAEVLVDKDSRHLIRERETLAQLWQGERLLP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtggattactttatccggaaagacaataccttatttgcggaagaatgccgggtcgctgaa
ctggcgaaaagctatggcacgccgctttatgtatattcccgcgccaccatagaaaggcac
tggcatgcctttgatgatgccgccggcgaacagccgcacttgatctgttatgcggtaaaa
gccaattccaatctggcgatattaaacctgctggcccgcttaggctcaggttttgatatt
gtttccaaaggcgagttggcccgggtactggctgccggcggtgatgctgctaaggtggta
ttttccggggtggcgaaaaaatccgatgaaatccgttatgcccttgagcagggaatttat
tgctttaatgtcgaatcggcgccggaactggcgcgtattaaccgggtagcgggtgagtta
ggggttaaggccccggtctccttacgggtgaatccggatgtcgatgccggcacccatccc
tatatttccaccggtttaaaagaaaataaattcggtatcagcatagaagatgccgaagcc
ctgtatctagctgcggataatttgccgcaccttgaagtcaaaggcatagattgccatatc
ggctcccagttgacggaattaaccccttttctcgatgccctggaccgggtactggtgttg
atcaataagctggcggcaacaggcattaaactctcgcacctggatgtcggcggcggttta
ggggtatgttaccgtgatgaaaccccgccccacccgaaagaatacgccaaggcgctggcg
gagaaactcgccggttatgacttaaccttgctgtatgaacccggacgggcgatcatggcc
aatgccggtattcttgtcaccgaagttgaatttttaaaaaccaaccaggaccggcatttt
gccatcgtcgatgccgccatgaacgacctgatccgtccgtcgctgtaccagtcctggcaa
gagattatcccggttgaacaacgccgggatgtcgatgagctaagctatgatgtagtaggc
ccggtatgcgaaaccggtgattttcttggcaaagatcgcttattggcaataaagcccggc
gatttgctggcggtgcgctccgccggggcttatggctttaccatgagttcaaactataat
agccggccccgggcggcggaagtgctggtggataaagatagccgccacctgatccgggag
cgggaaactctggcgcaactgtggcagggtgaacgtttattaccttaa
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