Thalassomonas haliotis: H3N35_26920
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Entry
H3N35_26920 CDS
T08805
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
that
Thalassomonas haliotis
Pathway
that00860
Porphyrin metabolism
that01100
Metabolic pathways
that01110
Biosynthesis of secondary metabolites
that01120
Microbial metabolism in diverse environments
that01240
Biosynthesis of cofactors
Module
that_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
that_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
that00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
H3N35_26920 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
that04147
]
H3N35_26920 (hemB)
Enzymes [BR:
that01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
H3N35_26920 (hemB)
Exosome [BR:
that04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
H3N35_26920 (hemB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
WDE11780
UniProt:
A0ABY7VDN7
LinkDB
All DBs
Position
complement(6269050..6270066)
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AA seq
338 aa
AA seq
DB search
MNNAFAQYPARRMRRMRADDFSRRLMAEHQLTVNDLIYPVFVLEGENQRQSIDSMPGVER
KSIDLLLEEARELVDLGIPAIAIFPVTPGDKKSLMAEEAYNPDGLAQRTVRALKANFPEL
GVITDVALDPFTTHGQDGIIDDDGYVLNEVTKDILVKQALSHAEAGADVVAPSDMMDGRI
GAIREVLEEKGFVNTRILAYSAKYASNYYGPFRDAVGSAGNIKGGNKHSYQMDPANSDEA
LHEIAQDIYEGADMVMVKPGMPYLDIVRRVKDNFKVPTYAYQVSGEYAMHMAAIQNGWLA
EKPCVMEGLLAFKRAGADGILTYFAKQVARWIKEDNAS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgcttttgctcaatatcccgctcgccgtatgcgccgcatgagggcggatgat
ttttcccgccgtttaatggcagaacaccagttaacggtgaatgatcttatctaccctgtg
tttgtcctggaaggggaaaaccagcgccagtcgatagattccatgccgggggtggagcgc
aaaagtattgacctgttactggaagaagcccgggaactggttgatttgggcattccggca
attgctattttcccggtcaccccgggagataaaaaatctttaatggcggaagaagcctat
aatcctgacggcctggcgcaacgtaccgttcgggcattaaaggcaaatttccctgagctt
ggggtgatcacagatgttgccctggacccttttaccacccatggtcaggatggcattatc
gatgatgacggttatgtgcttaatgaagtgactaaagatattttagtcaaacaggcgctg
tcccatgccgaggcgggcgccgatgtggtggctccttcggatatgatggacgggcgtatc
ggcgctattcgcgaagtgctggaagaaaaaggttttgttaatacccgtattctcgcctat
tcagctaaatatgcctccaactattatggcccgttcagggatgcggtcggctctgccggc
aatattaaagggggcaataaacattcctaccagatggatcccgccaattcggatgaagct
ttacatgaaatcgcccaggatatttatgaaggggcggatatggtgatggttaaacccggt
atgccttatctcgacatagtacgccgggttaaagacaactttaaggtgccgacttacgcc
tatcaggtcagtggtgaatatgccatgcacatggcggcaatccaaaacggctggctggcg
gaaaaaccttgtgtgatggaaggtttactggcctttaaacgtgccggcgccgacggcatc
ttaacctactttgccaaacaggtggcccgctggattaaggaagataacgcaagctaa
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