Thalassomonas haliotis: H3N35_26965
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Entry
H3N35_26965 CDS
T08805
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
that
Thalassomonas haliotis
Brite
KEGG Orthology (KO) [BR:
that00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
that03021
]
H3N35_26965 (rpoH)
Transcription machinery [BR:
that03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H3N35_26965 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
2Fe-2S_thioredx
GntR
Motif
Other DBs
NCBI-ProteinID:
WDE11789
LinkDB
All DBs
Position
complement(6278889..6279752)
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AA seq
287 aa
AA seq
DB search
MSNITQSMALTVPQSGSIEAYMQSAYSIPMLSAEREHELATRLYESNDLHAAQELIMSHL
RFVIHIAKGYAGYGLPQADLVQEGNVGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEFVL
RNWRIVKVATTKAQRKLFFNLRKNKKRLGWFSNEEISTVADTLGVSEKDVMEMESRMSNQ
DQAFELSSDDDDSSAGLGNFSPAQYLEDKQSDLATSVEDANWEDHANQRLSTALVALDER
SQDIIRTRWLNEDKSTLQELADKYQISAERVRQLEKNALGKLKSTMA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacataacgcaatcaatggcactgaccgtccctcaaagcggtagcattgaagca
tacatgcagtcggcgtatagcatacctatgcttagcgctgaacgtgagcatgagctggca
actcgtctttatgaaagtaatgacctgcatgcagcacaagagctgatcatgtcgcactta
cgcttcgttattcatatcgccaaaggttatgccggttacggcctgccgcaggcagacctg
gttcaggaaggcaatgtcggtttgatgaaagcggtaaagcgttttaaccctgaagtcggt
gtgcgcctggtgtcatttgccgttcactggatcaaagccgagattcatgaatttgtgctg
cgcaactggcgtatcgtgaaagtcgccactaccaaagcccagcggaaattatttttcaat
ctgcgtaaaaataaaaagcgccttggctggtttagcaatgaagaaatcagtaccgttgcc
gataccctcggagtgagtgaaaaagatgtgatggaaatggaatctcgtatgagtaaccag
gaccaggcatttgaattatcttccgatgacgacgacagcagcgccggtcttggtaatttt
tctccggcccaatacctggaagacaaacagtcggatctggccaccagcgttgaagatgcc
aactgggaagatcatgccaaccagcgtttatctacggcactggttgctttagacgagcgg
agccaggatattattcgtacccgctggttaaatgaagataaatccactttgcaggagctg
gcagataaataccagatttcggcagagcgtgtcagacagttggaaaaaaatgccctgggt
aaactgaaaagtaccatggcgtaa
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