Thauera humireducens Piv1: C4PIVTH_0412
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Entry
C4PIVTH_0412 CDS
T09509
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
thau
Thauera humireducens Piv1
Pathway
thau03030
DNA replication
thau03430
Mismatch repair
thau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C4PIVTH_0412 (dnaX)
03430 Mismatch repair
C4PIVTH_0412 (dnaX)
03440 Homologous recombination
C4PIVTH_0412 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thau03032
]
C4PIVTH_0412 (dnaX)
03400 DNA repair and recombination proteins [BR:
thau03400
]
C4PIVTH_0412 (dnaX)
Enzymes [BR:
thau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C4PIVTH_0412 (dnaX)
DNA replication proteins [BR:
thau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C4PIVTH_0412 (dnaX)
DNA repair and recombination proteins [BR:
thau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C4PIVTH_0412 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_18
AAA_22
AAA_16
RCF1-5-like_lid
AAA_assoc_2
AAA_14
AAA_5
AAA_30
DUF3646
Mg_chelatase
TsaE
AAA_19
nSTAND3
AAA_2
AAA_28
SKI
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
CAH1745577
LinkDB
All DBs
Position
C4PIVTH:complement(416766..418799)
Genome browser
AA seq
677 aa
AA seq
DB search
MSYQVLARKWRPKSFGTLVGQEHVVRALTHALATGRLHHAWLFTGTRGVGKTTISRILAK
ALNCETGITPEPCGVCDACRAIDADRFPDYVEMDAASNRGVDDMAALLDKAVYAPVQGRY
KVYMIDEVHMLTGHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPP
GHIVDHLTRILQAEEVSFEPGALRHIAKAANGSMRDALSLLDQSIAHGAGKVEEEQVTHM
LGTVGDDHLYAVLDALAAGNVTGLLAVADGMEARSLSFDAALQSLATLVHRIALAQYAPE
AIADEAERARIGSYAGAFDAEFLQLAYQIAIHGRDELPLAPDEYSGFTMTLLRLHAFRPD
QPAALGGPGVAPAGGGQARSLPAAASASPGGAQGALPGGARASSAVPAAEGGSPAVGVPA
PQPARVAVPRPAAPVPAAPLVEKAGPAPVVPAASAPAKASDNDVPPWEDLPPEAYADDYG
ATVAAPAPVRTLPEATTRSRGPEPAQATAAADVESPPVLSAAPVAAPPVAVPPVAGRASP
ASGGDVASLLAMGDWRGIIRALELGGLVRELAQHCEWVDCVEDELQLRLSTAHRHLLDMN
RAAVDRLQDLLGGATGRAMRVRITIGDIAGETPAQRDEIERRARHAEAVAALEADPFVRE
LIERFDATLVENTVKPL
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtccttgcgcgcaagtggcggccgaagtcctttggcacgctggtcggt
caggagcacgtcgtgcgggcgctgacgcacgcgcttgccacgggcaggctgcaccacgcc
tggctgtttaccgggacgcgcggcgtgggcaagaccacgatcagccgcatcctggccaag
gcgctgaactgcgagaccggcatcacgcccgagccctgtggtgtctgcgatgcctgccgc
gccatcgacgccgaccgcttccccgattacgtggagatggatgccgcgtccaaccggggc
gtcgacgacatggcggcgctgctcgacaaggccgtgtatgcgccggtgcaggggcgctac
aaggtctacatgatcgacgaagtgcacatgctcaccggccacgccttcaacgccatgctg
aagacgctggaggaacctccggagcatgtgaagttcatcctcgccactaccgatccgcag
aagattccggtgacggtgctgtcgcgctgcttgcagttcaacctcaagcagatgccgccc
ggccatatcgtcgaccacctgacgcgcatcctgcaggccgaggaggtgtccttcgagccc
ggcgcgctgcgccacatcgccaaggcggccaacggatcgatgcgcgatgcgctgtcgctg
ctcgaccagtcgatcgcgcacggtgcgggcaaggtcgaggaggagcaggtcacccacatg
ctgggcacggtcggcgacgaccatctgtatgccgtgctcgacgcactcgcggccgggaac
gtgaccggcctgctcgcggtggcggacggcatggaggcgcgcagcctgtctttcgatgcc
gcgctgcagtcgctggcgacgctggtgcatcgcatcgcgctggcgcagtacgcgccggag
gcgatcgcagacgaggccgagcgggcccgcatcggctcctatgccggcgccttcgatgcg
gagttcctgcagctcgcctaccagatcgcgattcacggccgggacgagctgccgttggcg
ccggacgaatactccggcttcacgatgacgttgctgcgcctgcatgcattccgccccgat
cagcctgcggcgctcggcgggcccggcgtcgcgccggcggggggcggtcaggcacgcagc
ctgccggctgctgcgtccgcaagtccggggggagcgcagggtgcgctcccgggcggggcg
agggcgtcgtctgcggttcccgcggcggagggcggaagtccggcggttggcgtgcctgcg
ccacagcccgctcgcgtagctgtcccccggcctgcggcccctgtgcccgctgcgccgctg
gtcgagaaggctgggccggcgcccgtcgttcccgcagcgagtgcgcccgcgaaggccagc
gataacgatgtgcctccttgggaggacttgccgcccgaggcgtatgcagacgattacggc
gccacggtggccgcccctgcgcccgtgcggaccttgcctgaagccacgacacgctcgcgc
ggtcctgagccggcgcaggcgacggctgctgctgacgtcgagtctcctccggtgctatct
gcggcccctgttgccgcaccgccggtcgctgttccgcccgttgccggccgggcttcgccg
gccagcggtggcgatgtcgcatccctgcttgcaatgggggattggcgtggcatcatccgc
gcgctcgaactcggcgggctcgtgcgcgagcttgcccagcattgcgagtgggtcgattgc
gtcgaggacgaattgcagttgcgcctgtcgacggcgcatcgccatttgctggacatgaac
cgcgctgcggtcgaccgtctgcaggatctgctcggtggggccacggggcgtgcgatgcgt
gtgcgcatcacgatcggcgacattgccggcgagacgccggctcagcgcgacgagatcgag
cgccgcgcgcgccatgccgaggcggtcgcagcgctggaagcggaccccttcgtgcgcgaa
ctcatcgaacgcttcgatgccaccctcgtcgaaaacaccgtgaagccgctttga
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