Thauera humireducens Piv1: C4PIVTH_1196
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Entry
C4PIVTH_1196 CDS
T09509
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
thau
Thauera humireducens Piv1
Brite
KEGG Orthology (KO) [BR:
thau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thau03400
]
C4PIVTH_1196
DNA repair and recombination proteins [BR:
thau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C4PIVTH_1196
Archaeal homologous recombinant proteins
C4PIVTH_1196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CAH1746361
LinkDB
All DBs
Position
C4PIVTH:complement(1264137..1267274)
Genome browser
AA seq
1045 aa
AA seq
DB search
MKPLKLSLQAFGPFATREEVDFTRLPPGALFLIAGPTGAGKTSILDGITYALYGDTSGGE
RSAREMRSHHADAALQTEVELAFALGAQRYRVRRVPEQTRAAQRGGGVVNAPAKAELFRL
DANGVDWIPLAQRTTEVTALVEDLLGFKADQFRQVVLLPQGQFRKLLAASSAEREKILET
LFGTATYKHLQDALKAEAAALRERGEKAALQRQTLLGQAGVDTMDALVARRDALQGQLVT
LGDAEQQVRAEDTAARAALQHGQAVEAQFAEAVAAAAALQALEAGKAELDAQRLRLEQAR
RAMQVLPADTALASARRSADEAVQREAQAARDATEAAQRLGQAEATLQAEIARAPAREAA
QRELLRLEGLADAVARLVQAEIEASRCEAARIAADKALAAATATQQTVAARRTTLAARID
ALQPLAAERAALELRLQQAEQRARALAALAAARKQLAGREAEETKARTRHEAAQRAAGEA
RAKAAALDADWRQAQAAILAAHLHAGEACPVCGSAAHPAPARHEGELPTEQALQAAAERA
REAEAVLDAARQALNLAELARATAAAEVATRAAELQPTDLQPAEGAAPEHPLSIVEEGPP
ATDAAELRRQLDAARAAALELEPLRVQLQATDAELGKAAIAGEQARTQAAEAASAARAAQ
HVADERRAGVPEALRTPAALQAGIAQAQDTRQRLERALQQAQSTHGEAASRAAALRAQHA
TLAEGVQAAQARVVEAHRQFVAALQTAGFWPDGTSKGDEGAADHAEAAWRAALLPAARIA
MLESAVRDADDRRAAAHERAGRAAQAVAGLIHPDLAALDARATASRAQVEAVVDRIGQTR
SELRTVTDTLARLDEIARESGAIEAEYRVVGHLADIANGNNGRNLTFQRYVLAALLDDVL
RAASLRLSAMSRGRYQLQRREDVADARRAAGLDLEVFDEYTGRTRPASTLSGGEGFMASL
SLALGLSDVVQAYAGGVQLDTLFIDEGFGSLDPESLDMAMKALIDLQQRGRTVGVISHVE
EMKQQIDVTIEVVQGVRGSRVKVQA
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgctcaagctcagcctgcaggccttcggccccttcgccacccgcgaggaggtg
gacttcacccgtctgccgcccggcgcgctgttcctcatcgccggccccaccggcgcgggc
aagacctccatcctcgacggcatcacctacgcgctctacggcgacacctcgggcggcgag
cgcagcgcgcgcgagatgcgcagccaccatgccgacgcggcactgcagaccgaggtcgag
ctggcgttcgcgctcggcgcgcagcgctaccgcgtgcgccgcgtgcccgagcagacccgc
gccgcgcagcgtggcggcggcgtggtcaatgcaccggcgaaggcggagctgttccgcctc
gatgccaatggtgtggactggattccgctcgcccagcgcaccaccgaggtcaccgcgctg
gtcgaggacctgctcggcttcaaggccgatcagttccgccaggtcgtgctgctgccgcag
ggccagttccgcaagctgctggcagccagttcggccgagcgcgagaagatcctcgagacc
ctgttcggcacggccacctacaagcacctgcaggacgccctcaaggccgaggcggccgcg
ctgcgcgaacgcggcgagaaggccgcgctgcagcgccagaccctgctcggccaggcaggc
gtcgacacgatggacgcgcttgtcgcccggcgtgacgcgctgcagggccaactggtgacg
ctcggtgacgccgagcagcaggtgcgggccgaagacaccgcggcgcgggccgcgctgcag
cacggtcaggcggtcgaggcccagttcgccgaagcggtcgccgccgccgcggcgctgcag
gcactcgaggccggcaaggccgaactcgacgcccagcgcctgcggctggaacaggcacgc
cgcgcgatgcaggtgctgccggccgataccgccctggcgtccgcgcgccgcagtgccgac
gaggcggtgcagcgcgaagcccaggccgcgcgcgacgccaccgaagccgcccagcgcctg
ggccaggccgaagccacgctgcaggccgagatcgcccgcgcgccggcgcgcgaggcggcg
cagcgcgagctgctgcgtctcgaagggctggccgacgcggtcgcccggctggtccaggcc
gagatcgaggccagccgctgcgaggcggcgcgcatcgccgcagacaaggcgctcgccgcc
gccacggccacgcagcagacggtcgccgcccgtcgcaccacgctcgccgcacgcatcgac
gccctgcagccgctcgcggctgagcgcgccgcgctcgagctgcgcctgcagcaggccgag
cagcgcgcccgtgcgctcgctgcactggccgcggcgcgcaagcagcttgccggccgcgag
gcggaggagaccaaggcgagaacccgccatgaggccgcgcagcgtgctgcaggcgaagcc
cgcgccaaggctgcggcgctggatgcggactggcgccaggcccaggccgccatcctggcc
gctcacctgcatgccggcgaggcgtgcccggtgtgcggcagtgcggcgcacccggcacct
gcccggcacgagggcgagctgccgaccgagcaggcgctgcaggccgcagccgagcgtgca
cgcgaggcggaggcggtgctcgatgccgcccgccaggcgctcaacctggccgagctggcg
cgcgccacggccgcggccgaggtcgccacgcgtgcggccgagttgcagcccaccgacttg
cagcctgccgagggcgctgcgcccgaacacccgctatcgatcgtggaggagggcccgccc
gcgaccgatgccgccgaactgcgacggcagctcgacgccgcccgcgcggccgcgctcgag
ctcgaacccctgcgcgtgcaactgcaggctaccgatgccgagctcggcaaggccgcaatc
gccggcgagcaagcccgcacccaggcggcggaggccgccagcgccgcgcgcgccgcgcag
cacgtggccgacgagcgtcgcgcaggcgtgcccgaagccctgcgtaccccggccgcgctg
caggccggcattgcccaggcgcaggacacgcgccagcgtctggaacgcgcgctgcaacag
gcccagtccacccacggcgaagcggccagccgggcggccgcgctgcgcgcgcagcacgcc
acgctggccgagggcgtgcaggccgcacaggcgcgtgtcgtcgaggcgcatcggcagttc
gtcgcggccttgcagacggcaggcttctggccggacggcacgagcaagggggacgagggg
gccgcggaccacgcggaagctgcctggcgtgcggcgctgctgccggccgcgcgcatcgcg
atgctcgagtccgccgtccgtgatgccgacgaccgccgcgccgcggcccacgagcgtgcc
ggacgcgccgcgcaggcggtggccggcctgatccatcccgatctcgccgcactcgacgcc
cgcgccacggcgtcgcgcgcgcaggtcgaagcggtggtcgaccgcatcggccagacccgc
agcgagctgcgcaccgtcaccgacacgctcgcccgtctcgacgagatcgcgcgcgaatcc
ggtgccatcgaggccgaataccgcgtcgtcggtcatctcgccgacatcgccaacggcaac
aacggccgcaacctcaccttccagcgctacgtgctcgccgcgctgctcgacgacgtgctg
cgcgcggcctcgctgcgcctgtcggccatgagccgcggccgctaccagctgcagcggcgc
gaggacgtggccgatgcccgccgcgccgcgggcctcgatctcgaggtcttcgacgaatac
accggccgtacgcgcccggccagcaccctgtccggcggcgagggcttcatggcctcgctg
tcgctcgcgctcggcctgtccgacgtggtccaggcctacgccgggggcgtgcagctcgac
accctgttcatcgacgaaggcttcggcagcctcgacccggaatcgctcgacatggcgatg
aaggcgctgatcgacctgcaacagcgcggtcgcacggtgggcgtgatctcgcacgtcgag
gagatgaagcagcagatcgacgtgacgatcgaggtggtgcagggggtgagggggagccgg
gtgaaggtgcaagcgtga
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