Thauera humireducens Piv1: C4PIVTH_1592
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Entry
C4PIVTH_1592 CDS
T09509
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
thau
Thauera humireducens Piv1
Pathway
thau03030
DNA replication
thau03410
Base excision repair
thau03420
Nucleotide excision repair
thau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C4PIVTH_1592 (polA)
03410 Base excision repair
C4PIVTH_1592 (polA)
03420 Nucleotide excision repair
C4PIVTH_1592 (polA)
03440 Homologous recombination
C4PIVTH_1592 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thau03032
]
C4PIVTH_1592 (polA)
03400 DNA repair and recombination proteins [BR:
thau03400
]
C4PIVTH_1592 (polA)
Enzymes [BR:
thau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C4PIVTH_1592 (polA)
DNA replication proteins [BR:
thau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C4PIVTH_1592 (polA)
DNA repair and recombination proteins [BR:
thau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C4PIVTH_1592 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C4PIVTH_1592 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
CAH1746749
LinkDB
All DBs
Position
C4PIVTH:1685221..1687974
Genome browser
AA seq
917 aa
AA seq
DB search
MPTLLLVDGSSYLYRAFHALPDLRNSQGEPTGAIRGVLSMLRRLESDYKAEFRACVFDAK
GKTFRDDWYPEYKSHRPPMPDDLRAQIAPLHEAVQAEGWPLLSVEGVEADDVIGTLTRQA
LERGWEVVISTGDKDLTQLVRPGVRWVNTMSEEVLDAAGVEAKFGVPPERIVDYLALVGD
TVDNVPGVEKCGPKTAVKWLTEYGTLDNLVANADKVGGKVGENLRKHLDFLPLGKQLVTV
ATDVELPVALDELPARDDDKAALRALYERFEFRGWLKDLDGGAASVAASKAATDSRRFAA
EPAEVADDPPSEPGAHRGGYVSILDWASFDTWLAKITAAELTAFDTETTSLDPMAARLVG
MSFSTDAGEAAYLPLAHRGADVPEQLPLAEVLDRLKPWLESDQHAKLGQNLKYDAHVLAN
HGIRLRGIAHDTLLESYVLESDKPHDMDSLAKRHLGLTTLPYTEVCGKGAKQIGFDEVAL
DRATEYAAEDADVTLRLHEHLWPQLEAVPQLAALYRDIELPVLSVLQQMERTGVLIDPFL
LSQHSEELGRRLHELEREAHDLAGQPFNLGSPKQLGEILFGKLGLPVVKKTATGQPSTDE
EVLEKLAEDYPLPKLLLEHRSLSKLKSTYADKLPRMVNPKTGRVHTSFSQATAVTGRLSS
SEPNLQNIPIRTPEGRRIRAAFIAPKDHFIVSADYSQIELRIMAHLSGDARLLEAFAHGE
DVHRATAGEVFGVPPAEVTSEQRRYAKVINFGLIYGMSAHGLAKNLGIERAAAQGWIDRY
FARYPGVADYMERTRVEAREQGFVETVFGRRLYLPDIRASQAGRRQAAERAAINAPMQGT
AADLIKKAMIAVSDWLAGSGLKSKLVLQVHDELVLEVPKAELDTIRAELPGLMGGVAALK
VPLLVEVGAGDNWDEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccctgctgctcgtcgatggctccagctatctctatcgcgctttccatgcgctg
cccgacctgcgcaattcgcagggcgagccgacgggggcgatccggggagtgctttcgatg
ctacgtcggctggaaagcgactacaaggcggaattccgcgcttgcgtgttcgacgccaag
ggcaagaccttccgcgacgactggtatcccgagtacaagtcgcaccgtccgccgatgccc
gacgacctgcgcgcgcagatcgcgccgctgcacgaggcggtgcaggccgagggctggccg
ctgctgtcggtggaaggcgtggaggccgacgacgtcatcggcacgctgacccgccaggcg
ctcgagcgcggctgggaagtcgtgatctcgaccggcgacaaggatcttacccagctcgtg
cgtcccggggtgcgctgggtcaacacgatgagcgaggaggtgctggacgcggccggcgtg
gaagcgaagttcggcgtgccgccggagcgcatcgtcgactacctggccttggtcggcgac
acggtggacaacgtgcccggcgtggaaaagtgcggtcccaagaccgcggtgaagtggctc
accgagtacggcaccctcgacaacctggtcgccaacgccgacaaggtcggcggcaaggtg
ggcgagaacctgcgcaagcacctggactttctgccgctgggcaagcagctggtgacggtg
gcgaccgatgtcgagctgccggtggcgctggacgaactgccggcgcgcgacgacgacaag
gcggcgctgcgcgcgctgtatgagcgcttcgagtttcgcggctggctcaaggacctggac
ggcggcgcggcgagcgtcgcggcgtcgaaggcggcgaccgacagccgccgcttcgccgcc
gagccggccgaggtggccgacgacccgccgagcgagccgggggcgcatcgcggcggctac
gtttcgattctcgactgggccagcttcgacacctggctggcgaagatcacggcggccgaa
ctcactgccttcgacaccgagaccaccagcctcgacccgatggccgcgcgcctggtcggc
atgtccttctcgaccgacgcgggcgaagccgcctacctgccgctggcgcatcgcggcgca
gacgtgcctgagcaactgccgctggccgaggtgctggacaggctcaagccctggctggag
tcggaccagcatgccaagctgggccagaacctgaagtacgacgcccacgtgctcgccaac
cacggcatcaggctgcgcggcatcgcgcacgacaccctgctcgaatcctacgtgctggag
tccgacaagccgcacgacatggattcgctcgccaagcgccacctcgggctgacgacactc
ccctataccgaggtctgcggcaagggcgccaagcagatcggcttcgacgaggtcgccctc
gatcgtgccaccgagtacgccgccgaggacgcggatgtgaccctgcgcctgcacgagcac
ctgtggccgcagctcgaagccgtgccgcagcttgccgcgctataccgcgacatcgagctg
ccggtgttgtcggtgctgcagcagatggagcgcaccggggtgctcatcgaccccttcctg
ctcagccagcattccgaggaactcgggcgccgcctgcacgagctggagcgcgaggctcat
gacctggctggccagcccttcaacctcggttcgcccaagcaactcggcgagatcctgttc
ggcaagctcggcctgccggtggtcaagaagacggccacgggccagccctccaccgacgag
gaggtgctggagaagctcgccgaggactacccgctgcccaagctgctgctcgaacaccgc
agcctgtcgaagctcaagagcacctacgccgacaagctgccacgcatggtcaatccgaag
accggccgggtgcataccagcttctcgcaagccaccgccgtcaccggccggctgtcgagc
tccgagcccaacctgcagaacatcccgatccgcacgccggaaggtcgccgcatccgtgcc
gccttcatcgcgccgaaggaccacttcatcgtctcggccgactactcgcagatcgagctg
cgtatcatggcccacctgtcgggcgacgcccgcctgctcgaagccttcgcccacggcgag
gacgttcatcgcgccactgctggcgaggtcttcggcgtgccgccggcggaggtcaccagc
gagcagcgccgctacgccaaggtcatcaacttcggcctcatctacggcatgagcgcgcac
ggcctggcgaagaacctcggcatcgagcgcgctgcggcgcagggctggatcgaccgctac
ttcgcccgctaccccggcgtcgccgactacatggagcgcacccgcgtcgaggcgcgcgag
cagggcttcgttgagaccgtgttcggccgccgcctctacctgcccgacatccgcgccagc
caggccggccgccgccaggccgccgagcgcgcggcgatcaacgcgccgatgcagggcacg
gccgccgacctgatcaagaaggcgatgatcgcggtgagcgactggctagcgggctcgggg
ctgaagtcgaagttggtgctgcaggtgcacgacgaactggtgctggaggtgccgaaggcc
gagctcgataccatccgcgccgaactgcctgggctgatgggcggcgtggcggcgttgaag
gtgccactgctggtggaggttggggcgggggacaactgggatgaggcgcattga
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