Thauera humireducens Piv1: C4PIVTH_1990 Help Entry C4PIVTH_1990      CDS       T09509                                  Symbol rpoB Name (GenBank) RNA polymerase subunit beta   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism thau  Thauera humireducens Piv1 Pathway thau03020   RNA polymerase Brite KEGG Orthology (KO) [BR:thau00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     C4PIVTH_1990 (rpoB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:thau03021]     C4PIVTH_1990 (rpoB)    03400 DNA repair and recombination proteins [BR:thau03400]     C4PIVTH_1990 (rpoB) Enzymes [BR:thau01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      C4PIVTH_1990 (rpoB) Transcription machinery [BR:thau03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      C4PIVTH_1990 (rpoB) DNA repair and recombination proteins [BR:thau03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       C4PIVTH_1990 (rpoB) SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 FH2 Motif Other DBs NCBI-ProteinID:  CAH1747138 LinkDB All DBs Position C4PIVTH:2103557..2107690 Genome browser AA seq 1377 aa AA seqDB search MAYSYTEKKRIRKSFAKRAAVLDAPFLLATQIESFAEFLQAETLPEARRTQGLQAAFSSI FPISSHSGNARLEFVQYMLGEPAFDVKECQQRGLTFASPLRARVRLVIMDREAPKETVKE VKEQEVYMGEIPLMTTTGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARI IPYRGSWLDFEFDPKDYLYFRVDRRRKMPVTILLRAIGMTPEEILATFHDFDNFHLQGEG AQFELVPDRLRGEVARFDIVTPDGKIIVARDKRITSKHIREIDQAGVKTIGVPDDFVLGR VIANDIADPETGEVLARANDEITEDLLDKLRLAGVTELRTLYINDLDRGGYISQTLRIDE TADQWAAKVAIYRMMRPGEPPTEDAVEGLFNGLFYAEERYDLSSVGRMKFNRRAYPEKID DKAPGWLKRFYERVGAQGEDGPGVLVNEDILAVIGVLVELRNGRGEIDDIDHLGNRRVRS VGELAENQFRAGLVRVERAVKERLSQAESDNLMPHDLINAKPISAAIKEFFGSSQLSQFM DQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSL AVYARTNRHGFLETPYRKVVDGKVTDQIDFLSAIEEGQYVIAQANAEIDAAGMLAGDLVS CRHKGEFLLATSDMVQYMDVAPGQIVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRP EKPLVGTGIERRVAVDSGTAVQATRGGIVDYVDANRIVVRVNDDETLAGEVGVDIYNMIK YTRSNQNTNINQRPVVKVGDRIAKGDVVADGASTDLGELALGQNMLVGFMPWNGYNFEDS ILISERVVADDRFTSIHVEELTVVARDTKLGPEEITRDIASLGEAQLSRLDESGIVYIGA EVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMVGTVIDVQVFT REGIERDKRAQSIIDDQLRSFKTDLADQMRIVERDAFARIKRMILGQKANGGPKKLAKGA VLTEEYLDSLEFYHWFDIRMADETLATQLEAVREGLENTRKDFDQAFEIKKKKLTQGDEL PPGVQKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIVPVEDMPYMEDGTPLDIVLNPLG VPSRMNIGQILETHLGWAAKGLGQQIDKMMQAKASADELRGFMDQIYNGSGKAEDIAGLS DDEVLDLAGNLKKGVPFATPVFDGAKESEIEQMLELAGLPVRGQVTLFDGRTGEAFERKV TVGYKHVLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAY TLQEMLTVKSDDVTGRTKVYENIVKGEHKIDSGMPESFNVLVKEIRSLAIDIDLDRK NT seq 4134 nt NT seq  +upstreamnt  +downstreamnt atggcgtattcctacactgaaaagaaacgtatccgcaagagcttcgccaagcgcgcggcc gtgctcgatgcgcctttcctgctcgccacccagatcgagtcgtttgccgagttcctgcag gctgaaaccctgccggaagccaggcgcacccagggcctgcaggcggccttttcctcgatc ttcccgatctcgagtcacagcggcaacgcgcggctcgagttcgtccagtacatgctgggc gagcctgccttcgacgtgaaggagtgccagcagcgcgggctgacgttcgcgtcgccgctg cgcgcgcgtgtgcgccttgtgatcatggatcgcgaagcgccgaaggagaccgtcaaggag gtcaaggagcaggaagtctacatgggcgagattccgctcatgaccacgaccggttccttc gtgatcaacggtaccgagcgcgtcatcgtgtcgcagctgcaccgttcgcccggcgtgttc ttcgagcacgaccgcggcaagacgcactcgtcgggcaagctgctgttctccgcccgcatc atcccctaccgcggctcctggctcgacttcgagttcgacccgaaggactacctgtacttc cgcgtcgatcgccgccggaagatgccggtcacgatcctgttgcgcgccattggcatgacg ccggaagagatcctcgcgaccttccacgacttcgacaacttccacctgcagggcgagggc gctcagttcgagctcgttcccgatcgcctgcgtggtgaggtggcgcgtttcgacatcgtc acccccgatggcaagatcatcgtcgcgcgtgacaagcgcatcacctccaagcatatccgc gagatcgaccaggcgggggtcaagacgatcggcgtgcccgacgacttcgtgctcggtcgc gtgatcgccaacgacatcgccgatcccgagaccggtgaggtgctggcgcgcgccaacgac gagatcaccgaggacctgctcgacaagctgcgcctcgccggtgtcaccgaactgcgtacc ctctacatcaacgaccttgatcgcggtggctacatctcgcagaccctgcgtatcgacgag accgctgatcagtgggctgccaaggtcgcgatctaccgcatgatgcgtccgggcgagccg cccaccgaagacgcggtcgaaggtctgttcaacggcctgttctacgccgaggagcgctac gacctgtcgtccgtgggtcgcatgaagttcaatcgccgcgcctatcccgagaagatcgac gacaaggcgccgggctggctcaagcgcttctacgagcgcgtcggtgcgcagggcgaagac ggcccgggcgtgctggtcaatgaagacatcctggccgtcatcggcgtgctggtcgagctg cgcaacggtcgcggcgagatcgacgacatcgaccacctcggcaaccgccgcgtgcgttcg gtcggcgaactcgccgagaaccagttccgcgccggcctggtgcgcgtcgagcgcgcggtc aaggagcgtctgtcgcaggctgagtccgacaacctgatgccgcacgacctgatcaatgcc aagccgatctcggccgcgatcaaggagttcttcggctcgagccagctgtcgcagttcatg gaccagaccaacccgctgtccgagatcacgcacaagcgtcgcgtctcggcgttgggcccg ggcggtctgacgcgcgagcgtgccggcttcgaggtgcgcgacgtgcacccgacccattac ggccgcgtgtgtccgatcgagacgccggaaggcccgaacatcggtctgatcaactcgctg gctgtgtatgcccgcaccaaccgccacggcttcctcgagacgccgtaccgcaaggtggtc gacggcaaggtcaccgaccagatcgatttcctgtcggcgatcgaggaaggccagtacgtg atcgcgcaggcgaacgccgagatcgacgccgccggcatgctggcgggcgacctcgtgtcc tgccgccacaagggtgagttcctgctggcgacctcggacatggtccagtacatggacgtt gcgccgggccagatcgtatcggtcgctgcctcgctgatcccgttcctcgagcacgacgac gcgaaccgcgcgctgatgggcgccaacatgcagcgccaggccgtgccctgcctgcgtccg gagaaaccgctggtcggtaccggcatcgagcgccgtgtggcggtcgactcgggcaccgcc gtgcaggccacgcgtggcggcatcgtcgactacgtcgatgcgaaccgtatcgtggtgcgg gtgaacgacgacgagaccctcgcgggtgaagtcggcgtcgacatctacaacatgatcaag tacacccgctcgaaccagaacaccaacatcaaccagcgtccggtggtgaaggtgggcgat cgcatcgccaagggcgacgtcgtggccgatggggcctcgaccgacctcggcgagctcgcg ctgggccagaacatgctggtcggcttcatgccgtggaacggctacaacttcgaagactcg atcctgatctccgaacgcgtggtcgccgacgatcgcttcacctcgatccacgtcgaggaa ctgacggtcgttgcccgtgacaccaagctcggacccgaggaaatcacccgcgacatcgca tcgctgggcgaggcgcaactgtcgcgcctggatgagtcgggcatcgtgtacatcggcgcc gaggtcgaagccggcgacgtgctggtgggcaaggtcacgccgaagggcgagacccagctg acgccggaagagaagctgttgcgcgcgatcttcggcgagaaggcgtccgacgtgaaggac acctcgctgcgcgtgccctcgggcatggtcggcaccgtcatcgacgtgcaggtcttcacc cgcgaaggcatcgagcgcgacaagcgcgcgcagtcgatcatcgacgaccagctgcgcagc ttcaagaccgacctcgccgaccagatgcgcatcgtcgaacgcgacgcgttcgcccgtatc aagcgcatgatcctgggccagaaggccaatggtggtccgaagaagctcgccaagggcgcc gtgctgaccgaggagtacctcgactcgctcgagttctaccactggttcgacatccgcatg gccgacgagacgctggcgacccagctcgaagcggtgcgcgagggcctggagaacacccgc aaggacttcgatcaggctttcgagatcaagaagaagaagctcacccagggcgacgaactg cccccgggcgtgcagaagatggtcaaggtgtacctggccgtcaagcgtcgcctgcagccg ggtgacaagatggccggccgtcacggtaacaagggtgtcgtgtcgaagatcgtcccggtc gaggacatgccctacatggaagacggcacgccgctggacatcgtgctgaacccgctgggc gttccgtcgcggatgaacatcggccagatcctcgagacgcacctcggctgggcggcgaag ggcctaggccagcagatcgacaagatgatgcaggccaaggcgtcggccgacgagctgcgc ggcttcatggaccagatctacaacggcagcggcaaggccgaggacatcgccggcctcagc gacgacgaagtgctggatctcgcaggcaacctgaaaaagggcgtgcccttcgcgactccg gtgttcgacggtgccaaggaatccgagatcgagcagatgctcgaattggccggcctgccg gtccgcggtcaggtcacgctgttcgatggccgtaccggcgaggccttcgagcgcaaggtg acggtgggctacaagcacgtgctcaagctgcaccacctggtcgatgacaagatgcacgcg cgttcgaccggcccgtactcgctcgtcacccagcagccgctgggcggcaaggcgcagttc ggtggccagcgcttcggtgagatggaagtttgggcgctggaggcgtacggtgcggcctac acgctgcaggaaatgctgacggtcaagtccgatgacgtgaccggccggaccaaggtgtac gaaaacatcgtcaagggcgagcacaagatcgattccggcatgccggagtccttcaacgtg ctggtgaaggaaatccgttcgctcgcgatcgatatcgatctcgaccgcaaataa

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