Thauera humireducens Piv1: C4PIVTH_2022
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Entry
C4PIVTH_2022 CDS
T09509
Symbol
rpoA
Name
(GenBank) RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
thau
Thauera humireducens Piv1
Pathway
thau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
thau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C4PIVTH_2022 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thau03021
]
C4PIVTH_2022 (rpoA)
03400 DNA repair and recombination proteins [BR:
thau03400
]
C4PIVTH_2022 (rpoA)
Enzymes [BR:
thau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C4PIVTH_2022 (rpoA)
Transcription machinery [BR:
thau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C4PIVTH_2022 (rpoA)
DNA repair and recombination proteins [BR:
thau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C4PIVTH_2022 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
CAH1747170
LinkDB
All DBs
Position
C4PIVTH:2128998..2129984
Genome browser
AA seq
328 aa
AA seq
DB search
MLMQSNALLKPRIIDVQSTSPVQARVTMEPFERGFGHTLGNALRRILLSSLPGHAPTEVT
IEGVLHEYSTLDGVREDIVDLLLNLKGVVFKLHNRSEVTLRLAKSGEGVVTAADIELGHD
VEIINPDHVIAHIAPGGKLDMQIKVEEGRGYVPGNVRPVNAESKAIGHIVLDASFGPVRR
VSYLVESARVEQRTDLDRLVIDIETNGAVDPEQAIRYAARVLMDQLSVFAELEGTAAPQV
TKPEVTIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNE
IKEVLASRGLTLGMKLENWPPAGLEKLG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgcaaagcaatgcactgctgaaaccgcgcatcatcgacgtccagagcacctcg
ccggtacaggcgagggtgacgatggagccgttcgagcggggtttcggtcacacgctgggg
aatgcgctgaggcgcatcctcctgtcgtcgctgcccggtcatgcaccgaccgaagtgacg
atcgagggagtcctccatgagtactccacgctggatggcgtccgcgaagacatcgtcgat
ctgctgttgaacctcaagggtgtggtgttcaagctgcataaccgtagcgaagtcaccctg
cgtctggccaagtcgggcgaaggcgtcgttacggcggccgacatcgagctgggtcatgac
gtcgagatcatcaaccccgaccacgtcatcgcgcacatcgcgcctggcggcaagctggac
atgcagatcaaggtcgaggaaggtcgcggctatgtgcctggcaacgtccgtccggtcaat
gccgaaagcaaggcgatcggtcacatcgtccttgatgcgtcgtttggcccggtgcgtcgc
gtcagctatctggtcgagagcgctcgcgtcgagcaacgcactgacctggatcgtctggtc
atcgacatcgaaaccaatggtgccgtggatcccgagcaggccatccgctacgctgcgcgc
gtgctgatggaccaactgtcggtgttcgccgagctggaaggcacggcggcgccgcaggtg
acgaagcccgaggtcacgatcgatccggtgctgctgcgtccggtcgacgatctggaactg
acggtgcgttcggccaactgcctgaaggccgagaacatctactacatcggcgatctgatt
cagcgtaccgagacggaactgctgaagaccccgaacctgggtcgcaagtcgctgaacgag
atcaaggaagtgctggcctcgcgcggtctcacccttggcatgaaactggaaaactggccg
ccggccgggcttgagaagctcggttga
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