Thauera humireducens Piv1: C4PIVTH_2890
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Entry
C4PIVTH_2890 CDS
T09509
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
thau
Thauera humireducens Piv1
Pathway
thau00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
thau00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C4PIVTH_2890 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
thau01007
]
C4PIVTH_2890 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thau03016
]
C4PIVTH_2890 (serS)
Enzymes [BR:
thau01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
C4PIVTH_2890 (serS)
Amino acid related enzymes [BR:
thau01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
C4PIVTH_2890 (serS)
Transfer RNA biogenesis [BR:
thau03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
C4PIVTH_2890 (serS)
Prokaryotic type
C4PIVTH_2890 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
ZapB
DUF3450
BLOC1_2
DUF7310
DivIC
TMF_TATA_bd
HOOK
DASH_Dad2
Cep57_MT_bd
DUF948
DUF1664
DUF4140
Knl1_RWD_C
Motif
Other DBs
NCBI-ProteinID:
CAH1748030
LinkDB
All DBs
Position
C4PIVTH:2987745..2989037
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AA seq
430 aa
AA seq
DB search
MLDIQLLRSQIDVVAARLASRGLQLDSAAFQALEDERKQLQTRTQELQARRNALSKQIGM
LKGKGEDVAPVMAEVAQLGDELKACEQALPGLLERINDFVARLPNLPHESVPVGEDERGN
VEVRRWGMPAQFDFEVRDHVDLGAPLGLDFETGAKLSGSRFAFLRGPIARLHRALAQFML
DTHTREHGYTECYTPYIVNREALFGTGQLPKFKEDLFWVLRGGDEEGVEQYLIPTAEITL
TNSVREDVLGLDALPIRMTAHSPCFRSEAGSGGRDVRGMIRQHQFDKVEMVQVVEPSTSY
EALEQMVGHAEAILQKLELPYRVITLCTGDMGFSAAKTYDLEVWLPAQNTYREISSCSNC
EAFQARRMQARFKNAQGKNELVHTLNGSGLAVGRTLVAVLENYQRADGAIVIPKALVPYM
GGVEVLEPAL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacattcaacttctgcgcagccagatcgatgtggttgccgctcgcctggccagc
cgcggactgcaactggacagcgctgcctttcaggcactcgaggacgaacgcaagcaactg
cagacccgcacccaggaactgcaggcgcggcgcaacgccttgtcgaagcagatcggcatg
ctcaagggcaagggcgaggacgtcgcgccggtgatggccgaggtggcgcaactcggcgat
gagctgaaggcctgcgagcaggccctgcccggcctgctggagcgcatcaacgacttcgtg
gcccgcctgcctaacctgccgcacgagagcgtgccggtcggcgaggacgagcggggcaac
gtcgaggtgcgccgctgggggatgccggcgcagttcgacttcgaggtgcgcgaccacgtc
gatctcggtgcgccgctgggtctggatttcgagaccggcgccaagttgtcgggttcgcgt
tttgccttcctgcgcggcccgatcgcgcgcctgcaccgtgcgctggcgcagttcatgctc
gacacccacacgcgcgagcacggctacaccgagtgctacacgccctacatcgtcaaccgc
gaggccttgttcgggactggccagctgcccaagttcaaggaagacctgttctgggtgctg
cgcggcggcgacgaggaaggtgtcgagcagtacctgatcccgactgccgagatcacgctg
accaacagcgtgcgcgaggacgtgcttgggctggatgcgctgcccatccgcatgacggcc
cacagcccctgcttccgctcggaggcaggcagcggtggccgcgacgtgcgcggcatgatt
cgccagcaccagttcgataaggtcgagatggtacaggtcgtcgagccttcgaccagctac
gaggcgctcgagcagatggtcggccacgccgaggccatcctgcagaagctcgagttgccc
taccgcgtgatcacgctgtgcaccggcgacatgggcttttccgcggcgaagacctacgac
ctcgaggtctggctgccggcgcagaacacttatcgcgagatctcgagctgctcgaactgc
gaggccttccaggcccgccgcatgcaggcgcgcttcaagaacgcccagggcaagaacgag
ctggtgcacacgctcaatggttctggcctggcggtgggtcgcacgctcgtagcggtgctg
gagaactatcagcgcgcggacggtgccatcgtgattcccaaggcgctggtgccctacatg
ggcggcgtcgaggtgctcgagccggcgctgtaa
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