Thauera humireducens Piv1: C4PIVTH_3421
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Entry
C4PIVTH_3421 CDS
T09509
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
thau
Thauera humireducens Piv1
Brite
KEGG Orthology (KO) [BR:
thau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thau03009
]
C4PIVTH_3421 (dbpA)
Enzymes [BR:
thau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
C4PIVTH_3421 (dbpA)
Ribosome biogenesis [BR:
thau03009
]
Prokaryotic type
rRNA helicases
C4PIVTH_3421 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
AAA_22
YlmH_RBD
IMS_C
Motif
Other DBs
NCBI-ProteinID:
CAH1748561
LinkDB
All DBs
Position
C4PIVTH:complement(3495298..3496752)
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AA seq
484 aa
AA seq
DB search
MTDIIPPDGPSAEHAVPPATTPAASARGFDALPLPSTMLANLQQLGYLSMTPIQAAALPP
ALGGRDLIAQAKTGSGKTVAFALPLLTRLEPQRLDVQALVLCPTRELADQVTQEIRRLAR
FADNIKVLSLCGGTPMRPQRESLAHGAHIAVGTPGRIMDHLERGSLKLDALTTLVLDEAD
RMLDMGFHDDIAWIASHCPVRRQTLLFSATFPAGIAALAQRYQREPLQVKLAEQHAPDKI
RQCFFEIEHAARLQAVATLLRHYRPTSALAFCNTRQQCRALVELLRSEGFHALALHGEMD
QRERDQVLIQFANRSCSVLVATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRGD
EAGLALSLCSNADRRRVATIAEAMGFTPEWQALDDLEIPNSSPLQPPMATLLILGGRKDK
IRPGDVLGALSGEAGLTREHVGKITVTDQNTYAAVAREIAGDAARRLAAGKLKGRTVKVR
VLEG
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacattatcccccctgacggccccagcgccgaacacgccgtccccccagccacc
acgcccgctgcctcggcccggggcttcgacgccctgcccttgccgtccaccatgctggcc
aacctccagcaactgggctatctgtcgatgacgccgatccaggctgcggcactgccgccc
gcgctgggcgggcgtgacctcatcgcccaggcgaagaccggcagtggcaagaccgtcgcc
ttcgccctgccactgctgacccgcctcgaaccccaacggctcgacgtgcaggccctggtg
ctgtgcccgacacgggaactggccgaccaggtcacgcaggagatccgccgcctcgcccgc
ttcgccgacaacatcaaggtgctgtcgctatgcggtggcacgccgatgcgcccgcaacgc
gaaagcctggcgcacggcgcccatatcgcagtcggcacgccgggccgcatcatggatcat
ctggagcgtggcagcctgaagctcgatgcgctgaccacgctggtactcgacgaggccgac
cgcatgctggacatgggcttccatgacgacatcgcgtggatcgccagccactgcccggtt
cgccgccagacgctcctgttctcggccaccttcccggcaggcatcgcggcgctggcgcag
cgctaccagcgcgaaccgctgcaggtgaagctcgccgagcagcatgcgccggacaagatc
cgccagtgcttcttcgagatcgaacacgcggcacgcctgcaggccgtcgccaccctgctg
cgccattaccggcccacgagcgcgctggccttctgcaacacgcgccagcaatgccgggcg
ctggtcgaactgctgcgcagcgagggcttccatgccctggcgctgcacggcgagatggac
cagcgcgagcgcgaccaggtgctgatccagttcgccaaccgcagttgctcggtgctggtc
gccacggatgtcgccgcacgcgggctggacatcgcacagctcgaggcggtgatcaacgtc
gatgtcacgcccgaccccgaggttcacgtccatcgcatcgggcgcacggggcggggcgac
gaagccggactcgcgctcagcctgtgcagcaacgccgatcgacgccgcgtggcgacgatc
gccgaggccatgggcttcacgcccgaatggcaggcgcttgacgacctggagatcccgaac
tcgtcgccgctgcagccgccgatggccacgctgctgatcctgggcggacgcaaggacaag
atccgccccggcgacgtgctgggcgccctttcgggcgaggcaggcctgactcgagagcat
gtgggcaagatcaccgtcaccgaccagaacacctacgcggccgttgcacgggagatcgcc
ggcgacgccgcccgccggctggctgcgggcaagctcaaggggcggacggtgaaggtccgc
gtgctcgaaggatga
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