Thauera humireducens Piv1: C4PIVTH_3808
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Entry
C4PIVTH_3808 CDS
T09509
Symbol
trmA
Name
(GenBank) tRNA/tmRNA (uracil-C(5))-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
thau
Thauera humireducens Piv1
Brite
KEGG Orthology (KO) [BR:
thau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thau03016
]
C4PIVTH_3808 (trmA)
Enzymes [BR:
thau01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
C4PIVTH_3808 (trmA)
Transfer RNA biogenesis [BR:
thau03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
C4PIVTH_3808 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_15
Methyltransf_12
Methyltransf_4
Methyltransf_31
MTS
Cons_hypoth95
DREV
Methyltransf_11
PrmA
Motif
Other DBs
NCBI-ProteinID:
CAH1748948
LinkDB
All DBs
Position
C4PIVTH:complement(3886890..3887984)
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AA seq
364 aa
AA seq
DB search
MSLDRIDPAQYESQLADKLATFRRDFAGLGLPEPEVFRSAPLHYRMRAEFRLWHHGGRID
YAMFESGEDSKKVVLIENFPAAAKPICDLMPRLRDALQESEVLKRKLFQVEFLATHSGEL
MVCLIYHRPLGDDWVDAAQALADRFGVQLIGRSRKQKIVLGRDWLLESFELDGRTLRYQQ
IEGSFTQPNVSVNRQMLGWACRQVADAGGDLLELYCGNGNFTIALAPAFDKVLATEVSKS
SVRAAHYNLDANGVGNVTMVRMSSDEISDALAGGREYRRMKDVALDSYRFSTLFVDPPRS
GLDAATVELARGFDRILYISCNPVTLRDNVAALQDTHEIAAAAVFDQFPYTHHLESGLLL
KRRA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcgaccgcatcgaccccgcccagtacgaatcccagctggccgacaagctcgcg
actttccggcgtgacttcgccgggctgggactgcccgagcccgaggttttccgctcggcg
ccgctgcattaccggatgcgcgccgagttccggctgtggcatcacggtggacgcatcgac
tacgcgatgttcgagagcggcgaggacagcaagaaggtcgtgctgatcgaaaatttcccc
gccgcggcgaagccgatctgcgacttgatgccgcgcctgcgcgacgccctgcaggaaagc
gaggtgctcaagcgcaagctgttccaggtcgagttcctggccacgcacagcggcgagctg
atggtgtgcctgatctatcaccgcccgctcggcgacgactgggtggacgcggcgcaggcg
ctggcggaccgcttcggcgtgcagctgatcggccgcagccgcaagcagaagatcgtgctg
gggcgcgactggctgctcgagtccttcgaactggatggccgcacgctgcgctaccagcag
atcgagggcagcttcacgcagcccaacgtgagcgtgaatcgccagatgctgggctgggcc
tgccgccaggtggcagacgcaggtggcgacctgctggagctgtattgcggcaacggcaac
ttcaccatcgcgctggcgccggccttcgacaaggtgctggcgaccgaggtcagcaagtcc
tcggtgcgtgcggcgcactacaacctcgacgccaacggcgtgggcaacgtcaccatggtg
cgcatgtcgagcgacgagatcagcgacgcgctcgccggtggccgcgagtaccgccgcatg
aaggacgtcgcgctcgacagctaccgcttctccacgctgttcgtcgatccgccccgcagc
gggctggatgcggccaccgtggaactggcgcgcgggttcgaccgcatcctctacatctcc
tgcaatccggtcacgctgcgcgacaacgtcgctgcactgcaggacacgcacgagatcgcc
gccgcagcggtgttcgaccagttcccttacacgcaccatctggaaagcgggctgctgctg
aagcgccgggcctga
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