Thauera humireducens Piv1: C4PIVTH_3893
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Entry
C4PIVTH_3893 CDS
T09509
Name
(GenBank) DNA-directed DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
thau
Thauera humireducens Piv1
Pathway
thau03030
DNA replication
thau03430
Mismatch repair
thau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C4PIVTH_3893
03430 Mismatch repair
C4PIVTH_3893
03440 Homologous recombination
C4PIVTH_3893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thau03032
]
C4PIVTH_3893
03400 DNA repair and recombination proteins [BR:
thau03400
]
C4PIVTH_3893
Enzymes [BR:
thau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C4PIVTH_3893
DNA replication proteins [BR:
thau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C4PIVTH_3893
DNA repair and recombination proteins [BR:
thau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C4PIVTH_3893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
T3SS_ExsE
Motif
Other DBs
NCBI-ProteinID:
CAH1749033
LinkDB
All DBs
Position
C4PIVTH:3972697..3973344
Genome browser
AA seq
215 aa
AA seq
DB search
MNNWLSRLLASNTASGPLSEQARQTLARWAALPEPDLARAHFETRYVVVNTEASGLDLDK
DRVLAVSAVGIDGGILAPQDSYYAVLGEHPAEALTGLLQAVGKAPLIVFNSAFNRTMLER
ALEEHLGLAADWLWIDLYFALPALFPERFERPTRLADCMSSFGIETFQRHHALGDGWAIA
QLFLAVQARALAQSALSPRGLADLERSYRQYRRKV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactggctctcccgcctcctcgcatcgaacacggccagcggccccctttccgaa
caggcgcggcagacgctcgcgcgatgggccgccctgcccgagcccgacctcgcccgcgcc
cattttgaaacccgctatgtcgtcgtcaacaccgaagcctccgggctcgatctcgacaag
gaccgggtgctcgcggtctcggcggtcggtatcgatggcggcatcctcgcaccgcaggac
agctactacgcggtcctcggcgagcaccctgcggaagcactgaccggcctgctgcaagcc
gtcggcaaggcgccgctgatcgtcttcaacagtgcattcaaccgcacgatgctcgagcgc
gcgctggaggagcacctcggcctcgccgccgactggctgtggatcgacctctatttcgct
ctgcccgccctgttccccgaacgcttcgaacgtcccacacggctcgcagactgcatgagc
agtttcggcatcgagaccttccagcgccatcacgccctgggtgacggctgggcgattgcc
cagctgtttctggcggtgcaagcccgcgcactggcgcagtccgcgctcagcccacgcgga
ctcgccgatctcgaacgcagctatcgccagtaccggcggaaggtctga
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