Thauera humireducens Piv1: C4PIVTH_3973
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Entry
C4PIVTH_3973 CDS
T09509
Symbol
uvrB
Name
(GenBank) excision nuclease subunit B
KO
K03702
excinuclease ABC subunit B
Organism
thau
Thauera humireducens Piv1
Pathway
thau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C4PIVTH_3973 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thau03400
]
C4PIVTH_3973 (uvrB)
DNA repair and recombination proteins [BR:
thau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C4PIVTH_3973 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C4PIVTH_3973 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_18
Kinesin
UB2H
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
CAH1749113
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All DBs
Position
C4PIVTH:complement(4048220..4050307)
Genome browser
AA seq
695 aa
AA seq
DB search
MTSQGNSAGNDAPQQGGKVVTFEGSPFRLHQPFPPAGDQPEAIRLLCEGVEDGLMYQTLL
GVTGSGKTYTMANVIARMGRPALVLAPNKTLAAQLYAEFKEFLPENAVEYFVSYYDYYQP
EAYVPSRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSCIYGIGDPVDYHAMI
LHLREGERMAHRDLIQRLVAMQYSRADIDFRRGTFRVRGDVIDVFPAENAELAVRIEMFD
DEIEHLTLFDPLTGHLKHKLARFTVYPSSHYVTPRATVLQAIEAIKEELKERIATFQREG
KLVEAQRIEQRTRFDLEMLNEMGFCKGIENYSRHLSGRGPGEPPPTLIDYLPADALLFID
ESHVAIGQVGGMYKGDRSRKENLVGYGFRLPSALDNRPLKFDEFERLMPQTVFVSATPAK
YEEEHQGQVVEQVVRPTGLIDPLVEVRPAMTQVDDLLTEIKKRLEVNERVLVTVLTKRMA
EDLTDYLADNGIRVRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVT
ILDADKEGFLRSERSLIQTIGRAARHLHGTAILYADRITDSMKAAIGETERRRHKQIAFN
EANGIVPKSVTKRIKDIIDGVYDSDGAKRDAARVAGKDADYAVMDEKALARAIKRLEKEM
QEHARNLEFEKAAAARDELFKLRQRAFGADQHGSV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtcaaggcaatagcgccggaaacgatgcaccgcagcaaggcgggaaggtggtc
accttcgagggcagccccttccgcctgcaccagccgtttccacctgccggcgaccagccc
gaggcgatccgcctgctgtgcgagggcgtggaagatggcctgatgtaccagaccctgctc
ggcgtgaccggctcgggcaagacctacaccatggccaacgtcatcgcccgcatgggccgt
ccggcgctggtgctggcgccgaacaagacgctggcggcgcagttgtacgcggagttcaag
gagttcctgcccgagaacgcggtcgagtacttcgtcagctactacgactactatcagccc
gaggcctacgtgccctcgcgcgaccttttcatcgagaaggactcgtcgatcaacgagcac
atcgagcagatgcggctctccgccaccaagagcctgatggagcggcgcgacgtggtgatc
gtggccacggtgtcgtgcatctacggcatcggcgacccggtcgattaccacgcgatgatc
ctgcacctgcgcgaaggcgagcgcatggcgcaccgtgatctcatccagcgtctggtggcg
atgcagtacagccgcgccgacatcgactttcgtcgcggcaccttccgcgtgcgcggcgac
gtgatcgacgtgttcccggcggagaacgccgagctggcggtgcgcatcgagatgttcgac
gacgagatcgagcatctgacgctgttcgacccgctcaccgggcatctgaagcacaagctg
gcgcgcttcaccgtgtatccgtccagccactacgtcaccccgcgcgcgacggtgctgcag
gcgatcgaggcgatcaaggaggagctgaaggagcgcatcgccacgttccagcgcgagggc
aagctggtggaggcccagcgcatcgagcagcgcacccgcttcgacctcgagatgctcaac
gagatgggcttctgcaagggtatcgagaactactcgcggcatctgtcgggtcgcggcccg
ggcgagccgccgccgaccctgatcgactatctgccggccgatgcgctgctgttcatcgac
gagtctcacgtggccatcggccaggtgggcggcatgtacaagggcgaccgttcgcgcaag
gagaacctggtcggctacggtttccgcctgccctcggcgctcgacaaccggccgctgaag
ttcgacgagttcgagcgcctgatgccgcagaccgtgttcgtttcggcgacgccggcgaag
tacgaggaggagcaccagggccaggtggtggagcaggtggtgcgcccgaccggcctgatc
gatccgctggtggaggtgcgtccggcgatgacgcaggtggatgacctgctcaccgagatc
aagaagcggctcgaggtgaacgagcgcgtgctggtcaccgtgctgaccaagcgcatggcc
gaggacctgaccgattacctcgccgacaacggcatccgcgtgcgctacctgcactcggac
atcgacacggtggaacgggtcgagatcatccgcgacctgcgcctgggcgagttcgatgtg
ctggtgggcatcaacctgttgcgcgagggcctggacatccccgaagtgtcgttggtgacg
atcctcgatgcggacaaggaaggcttcctgcgctccgagcgctcgctgatccagaccatc
ggccgcgccgcgcgccatctgcacggcacggcgatcctctacgccgaccgtatcaccgac
tcgatgaaggcggccatcggcgagaccgaacgtcgccggcacaagcagattgccttcaac
gaggccaacggcatcgtgcccaagtcggtgaccaagcgcatcaaggacatcatcgacggg
gtctatgattcggatggggccaagcgcgatgccgcccgcgtggccgggaaggacgccgac
tatgcggtgatggacgagaaggcactggcgcgggcaatcaagcgtctggagaaggagatg
caggagcacgcccgcaacctggagttcgagaaggccgctgcggcacgcgacgagctgttc
aagctccgtcagcgcgcatttggcgcagaccagcacggcagcgtttga
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